Gene detail information of Glyur000837s00027492 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | KHN30730.1 | 1.38E-28 | hypothetical protein glysoja_034073 [Glycine soja] |
| trEMBL | tr|I1LCD7|I1LCD7_SOYBN | 5.00E-29 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA10G33260.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00837 | 28020 | 28289 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 22.000 |
| SRR1783600 | control | 22.112 |
| SRR1783602 | moderate drought stress | 23.943 |
| SRR1811619 | moderate drought stress | 22.680 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 8.591 |
| SRR2868004 | Drought Stress (root) | 36.416 |
| SRR2967015 | Control (root) | 30.594 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.544 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.391 |
| SRR9715739 | Root | 61.903 |
| SRR9715742 | Root | 35.469 |
| SRR9715743 | Root | 36.571 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 654.870 |
| SRR8749028 | MeJA induced 9h | 1380.177 |
| SRR8749029 | MeJA induced 9h | 752.692 |
| SRR8749030 | Uninduced | 1042.597 |
| SRR8749031 | Uninduced | 833.444 |
| SRR8749032 | Uninduced | 3582.008 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 70.077 |
| SRR8400027 | Control - Root | 85.958 |