Gene detail information of Glyur000837s00027490 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G33420.1 | 0 | Protein of unknown function (DUF810) |
| NR | XP_004495307.1 | 0 | PREDICTED: uncharacterized protein LOC101512395 isoform X1 [Cicer arietinum] |
| trEMBL | tr|I1NI08|I1NI08_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA20G34360.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00837 | 21392 | 25634 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000837s00027490.1 | PF05664.6 | DUF810 | 44 | 450 | 6.60E-138 |
| Glyur000837s00027490.1 | PF05664.6 | DUF810 | 462 | 734 | 1.30E-85 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.073 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.073 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.189 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.185 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.329 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.338 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.002 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.819 |
| SRR2868004 | Drought Stress (root) | 1.103 |
| SRR2967015 | Control (root) | 1.312 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.295 |
| SRR9715740 | Leaf | 0.021 |
| SRR9715741 | Leaf | 0.539 |
| SRR9715739 | Root | 0.050 |
| SRR9715742 | Root | 0.101 |
| SRR9715743 | Root | 0.069 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 8.688 |
| SRR8749028 | MeJA induced 9h | 10.472 |
| SRR8749029 | MeJA induced 9h | 18.732 |
| SRR8749030 | Uninduced | 6.715 |
| SRR8749031 | Uninduced | 34.375 |
| SRR8749032 | Uninduced | 27.015 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.023 |
| SRR8400027 | Control - Root | 0.126 |