Gene detail information of Glyur000836s00028085


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G52300.11.00E-52ATP synthase D chain, mitochondrial
NRXP_009598864.15.53E-91PREDICTED: ATP synthase subunit d, mitochondrial-like [Nicotiana tomentosiformis]
Swissprottr|Q9FT52|ATP5H_ARATH5.00E-84ATP synthase subunit d, mitochondrial
trEMBLtr|B9SUN3|B9SUN3_RICCO6.00E-91ATP synthase D chain, mitochondrial, putative {ECO:0000313|EMBL:EEF32668.1}

Sequence

Transcript Sequence
Protein Sequence


Location information (JBrowse)

ScaffoldStartEndStrand
Scaffold00836679311012+


Gene family

Gene familysubfamily
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KEGG pathway

KOEnzymeEnzyme IDpathwaymapID
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Gene Ontology

biological_process

GO:0015986  ATP synthesis coupled proton transport


cellular_component

GO:0000276  mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)


molecular_function

GO:0015078  hydrogen ion transmembrane transporter activity

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000836s00028085.1PF05873.7Mt_ATP-synt_D151348.70E-11


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control25.363
SRR1783600control24.914
SRR1783602moderate drought stress18.258
SRR1811619moderate drought stress17.841

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain48.452
DRR006520Root Summer glycyrrhizin high producing strain46.627
DRR006521Root Winter glycyrrhizin high producing strain5.616
DRR006522Root Winter glycyrrhizin high producing strain5.381
DRR006523Root Summer glycyrrhizin low producing strain14.454
DRR006524Root Summer glycyrrhizin low producing strain14.164
DRR006525Leaf Summer glycyrrhizin high producing strain23.805
DRR006526Leaf Summer glycyrrhizin high producing strain22.646

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress (root)44.194
SRR2868004Drought Stress (root)22.669
SRR2967015Control (root)26.099

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leaf13.330
SRR9715740Leaf16.390
SRR9715741Leaf10.409
SRR9715739Root12.137
SRR9715742Root24.089
SRR9715743Root18.470

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h22.494
SRR8749028MeJA induced 9h16.189
SRR8749029MeJA induced 9h17.842
SRR8749030Uninduced3.508
SRR8749031Uninduced1.508
SRR8749032Uninduced2.183

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment - Root53.606
SRR8400027Control - Root66.429

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved