Gene detail

Gene detail information of Glyur000835s00034476

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT2G45550.1	4.00E-117	cytochrome P450, family 76, subfamily C, polypeptide 4
NR	XP_004506725.1	0	PREDICTED: geraniol 8-hydroxylase-like [Cicer arietinum]
COG	YP_007126612.1	4.00E-32	Unspecific monooxygenase [Gloeocapsa sp. PCC 7428]
Swissprot	tr\|Q8VWZ7\|C76B6_CATRO	2.00E-158	Geraniol 8-hydroxylase
trEMBL	tr\|I1KIM3\|I1KIM3_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA07G09110.1}

Sequence

Transcript Sequence

>Glyur000835s00034476.1
ATGGACTACATGAAATTTCTCCCACTGATTTCCTTTGCATATGCATGCATTCATCTCCTAGCCTTTAGCCTTATTAGCCTCAAAAACACANAAAAATCTCACAACCTCCCACCAGGTCCTCCAAGTTACCCTTTAATTGGAAACATATTGCAACTTGGCCCATCCAAACTTCACCAAACACTTACCAAACTCTCCAAAACATATGGACCCATCATGACGGTTAAGATAGGAACCATCACCACTGTGGTCATTTCCTCTCCANCCATAGCCAAAGAAGCACTTCACAAATATGACCAAGCCTTANCTAGNAGATTNATACCAGATTCTGTTCAAGCACTTTCACATCACAAATCCTCTGTAATATTCATGCCCATATCACCAAAATGGAAGACCCTTAGAAAAATTTGTGCCACAAAAATATTCTCTGCTCAAATGCTTGATTCCACTCAATCCCTTCGCCAAGAGAAACTTAAAGAACTAATTGTTTACTTGCAAGAGAATTGCAAAAAGGGTAATGCTATTGATATTGGTGAGGCTGCATTTACTACAGCACTTAACTCAATAACAAATACCCTTTTTTCTATTGACTTGGCTAGCCATAGTTCTGTTTCTTCTCAGAAGTTTAGGAATGTTGTTTCCTCTATGCTAGTGGAAGCTTCAAAGCCTAATGTTGCAGACTATTATCCTGTTCTGCGGAGAATTGACCCACAGGGTGCACGAAGAAGGATGGAAGGCTATTACCAGACACTACTTACACTTTTTGAGTCTATTATTGAAGAAAGAATTCATGATCAAGAAAAGAAAGAGCACTCCATGGAAGGAAGTGATGTGTTGGACTCATTTCTCAACATCACACGAAANGAGAATCCTGAATTAACACTCCATGATGTGTTACATCTGTTTCTGGACTTATTTGCGGCTGGGATGGACACTACATCAGCAACAGTAGAATGGGCCATGGCAGAGTTGCTACAAAACCCAGAGAAATTGATGAAAGCAAGAAAAGAACTTCAACAAGTTTTCAACAAAGATATTGGAGGAGAACCCANAGATTCAGACATCCCTAAGCTCCCTTACCTNCAAGCCATTGTAAAAGAAACCCTCAGATTGCACCCAGCAGCACCCATATTAGTCCACAAATCAGTGGCTGAGGTAAACATGTGTGGCTTCAGGGTACCAAAAGANGCACAGGTTCTTGTTAATGTGTGGGGCATGGGAAGAGACTCTAGCATTTGGAGTGACCCAAATTCGTTTGTACCTGAAAGGTTTTTGGGAAGTGGAGAGGATTTTAGAGGAGAGGATGTTGGGTTCATCCCTTTTGGAGCTGGTAGAAGAATGTGCCCTGGTGTTCCACTTGCTAACAGGGTTGTGCATACCATGTTGGCCTCACTTTTGTACCATTTTGATTGGAAGCTAGCTGATGGGCAAAAGTCTGAAGGCATGGATATGACTGAAGGATTTGGGATTACCTTACATAAGGTCAAGCCTCTCATGGCCATTCCCATCAAAGAATAG

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00835	73296	75839	+

Gene family

Gene family	subfamily
Cytochrome P450 Family	CYP76C3

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0055114 oxidation-reduction process

molecular_function

GO:0005506 iron ion binding

GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

GO:0020037 heme binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000835s00034476.1	PF00067.17	p450	37	493	4.60E-100

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	2.197
SRR1783600	control	2.432
SRR1783602	moderate drought stress	0.163
SRR1811619	moderate drought stress	0.148

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.000
DRR006520	Root Summer glycyrrhizin high producing strain	0.000
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	0.359
DRR006524	Root Summer glycyrrhizin low producing strain	0.316
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.061
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.061

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	0.227
SRR2868004	Drought Stress (root)	0.763
SRR2967015	Control (root)	0.472

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	0.088
SRR9715740	Leaf	0.083
SRR9715741	Leaf	0.085
SRR9715739	Root	1.679
SRR9715742	Root	8.203
SRR9715743	Root	6.102

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.070
SRR8749028	MeJA induced 9h	0.000
SRR8749029	MeJA induced 9h	0.120
SRR8749030	Uninduced	0.000
SRR8749031	Uninduced	0.176
SRR8749032	Uninduced	0.000

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	0.468
SRR8400027	Control - Root	0.093