Gene detail information of Glyur000834s00025313 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G56590.1 | 3.00E-91 | hydroxyproline-rich glycoprotein family protein |
| NR | XP_004514905.1 | 0 | PREDICTED: uncharacterized protein LOC101508642 [Cicer arietinum] |
| trEMBL | tr|K7LIM8|K7LIM8_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA10G19700.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00834 | 92677 | 96728 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 26.920 |
| SRR1783600 | control | 27.926 |
| SRR1783602 | moderate drought stress | 17.572 |
| SRR1811619 | moderate drought stress | 18.293 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 14.820 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 14.755 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.720 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.588 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 13.532 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 13.746 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 10.528 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 10.883 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 21.700 |
| SRR2868004 | Drought Stress (root) | 18.152 |
| SRR2967015 | Control (root) | 16.536 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.905 |
| SRR9715740 | Leaf | 5.144 |
| SRR9715741 | Leaf | 5.329 |
| SRR9715739 | Root | 8.440 |
| SRR9715742 | Root | 11.826 |
| SRR9715743 | Root | 10.669 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 15.018 |
| SRR8749028 | MeJA induced 9h | 13.661 |
| SRR8749029 | MeJA induced 9h | 8.429 |
| SRR8749030 | Uninduced | 4.383 |
| SRR8749031 | Uninduced | 1.909 |
| SRR8749032 | Uninduced | 3.468 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 15.912 |
| SRR8400027 | Control - Root | 18.456 |