Gene detail information of Glyur000833s00030505 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G41020.1 | 5.00E-96 | myb family transcription factor |
| NR | XP_003541381.2 | 0 | PREDICTED: transcriptional regulator ATRX homolog isoform X1 [Glycine max] |
| trEMBL | tr|I1LYQ8|I1LYQ8_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G19060.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00833 | 98095 | 100236 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | MYB-related |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000833s00030505.1 | PF13921.1 | Myb_DNA-bind_6 | 507 | 564 | 2.90E-10 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 53.634 |
| SRR1783600 | control | 52.280 |
| SRR1783602 | moderate drought stress | 68.547 |
| SRR1811619 | moderate drought stress | 68.609 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 86.542 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 85.923 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 57.570 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 55.641 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 115.959 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 115.482 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 45.646 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 44.527 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 49.420 |
| SRR2868004 | Drought Stress (root) | 46.680 |
| SRR2967015 | Control (root) | 44.333 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 20.912 |
| SRR9715740 | Leaf | 34.996 |
| SRR9715741 | Leaf | 27.566 |
| SRR9715739 | Root | 2.003 |
| SRR9715742 | Root | 11.832 |
| SRR9715743 | Root | 11.139 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 58.452 |
| SRR8749028 | MeJA induced 9h | 51.716 |
| SRR8749029 | MeJA induced 9h | 52.010 |
| SRR8749030 | Uninduced | 28.542 |
| SRR8749031 | Uninduced | 24.490 |
| SRR8749032 | Uninduced | 29.706 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 36.623 |
| SRR8400027 | Control - Root | 34.825 |