Gene detail information of Glyur000833s00030503 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G14740.2 | 7.00E-124 | Plant protein of unknown function (DUF828) with plant pleckstrin homology-like region |
| NR | XP_003520265.1 | 0 | PREDICTED: uncharacterized protein LOC100793882 isoform X1 [Glycine max] |
| trEMBL | tr|I1JB80|I1JB80_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA02G00760.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00833 | 81274 | 86119 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000833s00030503.1 | PF05703.6 | Auxin_canalis | 29 | 339 | 1.40E-96 |
| Glyur000833s00030503.1 | PF08458.5 | PH_2 | 388 | 497 | 3.10E-48 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.733 |
| SRR1783600 | control | 3.706 |
| SRR1783602 | moderate drought stress | 4.531 |
| SRR1811619 | moderate drought stress | 4.570 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.475 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.450 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.636 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.736 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 6.262 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 6.030 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.008 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.199 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 16.965 |
| SRR2868004 | Drought Stress (root) | 21.089 |
| SRR2967015 | Control (root) | 28.974 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 19.554 |
| SRR9715740 | Leaf | 19.077 |
| SRR9715741 | Leaf | 18.065 |
| SRR9715739 | Root | 1.955 |
| SRR9715742 | Root | 7.416 |
| SRR9715743 | Root | 5.697 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.498 |
| SRR8749028 | MeJA induced 9h | 0.888 |
| SRR8749029 | MeJA induced 9h | 0.527 |
| SRR8749030 | Uninduced | 0.390 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 1.126 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 10.160 |
| SRR8400027 | Control - Root | 9.215 |