Gene detail information of Glyur000833s00030495 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G42880.1 | 5.00E-23 | MAP kinase 20 |
| NR | ACJ85654.1 | 5.93E-24 | unknown [Medicago truncatula] |
| Swissprot | tr|Q9SJG9|MPK20_ARATH | 2.00E-25 | Mitogen-activated protein kinase 20 |
| trEMBL | tr|B7FLM0|B7FLM0_MEDTR | 2.00E-24 | Putative uncharacterized protein {ECO:0000313|EMBL:ACJ85654.1} (Fragment) |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00833 | 21089 | 24475 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 8.429 |
| SRR1783600 | control | 8.684 |
| SRR1783602 | moderate drought stress | 7.419 |
| SRR1811619 | moderate drought stress | 6.619 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 20.603 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 17.832 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.772 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.671 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 21.377 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 21.772 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 32.476 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 30.671 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 22.708 |
| SRR2868004 | Drought Stress (root) | 31.526 |
| SRR2967015 | Control (root) | 29.834 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 12.021 |
| SRR9715740 | Leaf | 23.411 |
| SRR9715741 | Leaf | 12.045 |
| SRR9715739 | Root | 2.692 |
| SRR9715742 | Root | 4.477 |
| SRR9715743 | Root | 2.809 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 6.719 |
| SRR8749028 | MeJA induced 9h | 5.192 |
| SRR8749029 | MeJA induced 9h | 3.402 |
| SRR8749030 | Uninduced | 6.693 |
| SRR8749031 | Uninduced | 3.942 |
| SRR8749032 | Uninduced | 1.715 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 21.531 |
| SRR8400027 | Control - Root | 22.914 |