Gene detail

Gene detail information of Glyur000832s00032817.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G25580.1	7.00E-112	NAC (No Apical Meristem) domain transcriptional regulator superfamily protein
NR	XP_006605343.1	0	PREDICTED: uncharacterized protein LOC100787422 isoform X1 [Glycine max]
Swissprot	tr\|Q6NQK2\|NAC8_ARATH	9.00E-152	NAC domain-containing protein 8
trEMBL	tr\|K7N4B9\|K7N4B9_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA20G32690.2}

Sequence

Transcript Sequence

>Glyur000832s00032817.1
AAAAAAAACACTTCGAATCATCTGAAGTTTCAGAGAGCGGGAGAAGGGCACCGGAGAAAGAGAAGCAACCCTGANAGTAGATGATGTTTTTGAATCCCCGTCACACTCACACCTGAATTGAAAAGCATCACCAATTCCTCTCTCTTTCTCTCATATGGCTGGACCATCATGGTTGGTGGACAAAAGTAGAATTGCAACCAAAATAAAGAGTGCATCTGGAGCATTTGGAAAAGTTATATGGAAAAGCAATCCTACCAGAGCTTGCCCAAATTGTCAACANGTTATTGACAACAGTGATGTAGCACAAGAGTGGCCTGGACTGCNTAAAGGTGTTAAATTTGATCCATCTGATCAAGAGATAATATGGCACTTGCTAGCAAAAGCTGGTGCAGGAAATTCAAAACCCCACCCCTTCATTGACGAATTTATTACTACTCTTGAAGTGGATGATGGTATTTGTTANACTCATCCTCAACATTTACCAGGTGTCAAGCAAGATGGAAGTGCTTCCCACTTTTTCCATANAGCAATCAAAGCTTATAATACTGGCAGTCGAAAGCGTCGGAAAATATATGGTCAGGATTTTGGTGATGTCCGCTGGCACAAGACTGGAAAGACTAAANCTGTAATCTTGAANGGTGTTCAAAAAGGCTGTAAAAAGATTATGGTTCTCTATATGAGCCTGGTGAGAGGAGGAAAAGCTGAGAAAACTAATTGGGTTATGCATCAATATCATCTTGGAACAGAAGAAGGTGAAAAGGATGGAGAGTATGTTATATCTAAAGTATTTTACCAGCAGCAGCAAGTCAAATTGAGTGAAAAAGATGACCAGGATGTTCCTGAGACCACTGAAGCAACTATTGTGAAAGTGGATCCGGTCACTCCCAAATCCGTGACTCCTGNACCTCCTCGCAATGAAAAGCAATGTTCAGTTCTAGACCAAGAACAAGAATCTCATGATATTCCTCAGCTTCCTCGGTTAGAATGTGTAGACGACATTCAGGCTGACCATGAAGAGCTTGCAAAAAATGATCCATCGATTGTAGAAACTCAAAACAATGAAGGGATAGATAATATAGAAAATAATGCTGATGAAGACACAAAATGGTGGGATAGTGAGTCACAGAATCTTTTGGATTCACAACAACTTGTGGAAGCATTGTCCTTGTGTGATGATCTCCTTCAAAGCCAGTCTCCCAAAAGGGACAGGGAAAATGAAGAACAAAAGGAACGACCCAGTCTTTCTGTTTATGCTCGTCTAGGACCAGAGTATCTGAAGAAAGATATTGAAGAGTGCCAAAATCTTGTCCTTGACACTGAAAATCTTGACCTTGAGACACCACCTTCAGANTTTCGACTAAGTCAACTGGTATTCCCTTGTTCTCAATGA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00832	104579	107519	-

Gene family

Gene family	subfamily
Transcription Factors Family	NAC

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006355 regulation of transcription, DNA-templated

molecular_function
GO:0003677 DNA binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000832s00032817.1	PF02365.10	NAM	57	195	5.60E-29

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	1.089
SRR1783600	control	1.155
SRR1783602	moderate drought stress	9.465
SRR1811619	moderate drought stress	9.378

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	1.960
DRR006520	Root Summer glycyrrhizin high producing strain	1.930
DRR006521	Root Winter glycyrrhizin high producing strain	2.806
DRR006522	Root Winter glycyrrhizin high producing strain	2.787
DRR006523	Root Summer glycyrrhizin low producing strain	2.376
DRR006524	Root Summer glycyrrhizin low producing strain	2.308
DRR006525	Leaf Summer glycyrrhizin high producing strain	1.768
DRR006526	Leaf Summer glycyrrhizin high producing strain	1.951

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	2.711
SRR2868004	Drought Stress (root)	2.366
SRR2967015	Control (root)	4.131

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	2.311
SRR9715740	Leaf	0.634
SRR9715741	Leaf	1.757
SRR9715739	Root	0.071
SRR9715742	Root	0.717
SRR9715743	Root	0.375

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	6.167
SRR8749028	MeJA induced 9h	9.478
SRR8749029	MeJA induced 9h	4.049
SRR8749030	Uninduced	3.314
SRR8749031	Uninduced	4.533
SRR8749032	Uninduced	2.249

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	2.699
SRR8400027	Control - Root	2.092