Gene detail information of Glyur000830s00028259 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G34980.1 | 2.00E-76 | phosphatidylinositolglycan synthase family protein |
| NR | XP_003540220.1 | 9.17E-134 | PREDICTED: putative phosphatidylinositol N-acetylglucosaminyltransferase subunit C-like isoform X1 [Glycine max] |
| trEMBL | tr|I1LPA0|I1LPA0_SOYBN | 3.00E-134 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA12G02220.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00830 | 25442 | 26356 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000830s00028259.1 | PF06432.6 | GPI2 | 17 | 218 | 9.20E-54 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 9.382 |
| SRR1783600 | control | 9.762 |
| SRR1783602 | moderate drought stress | 11.757 |
| SRR1811619 | moderate drought stress | 11.720 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.122 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.204 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.662 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.819 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.708 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 5.698 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 8.349 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 8.439 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 5.736 |
| SRR2868004 | Drought Stress (root) | 6.592 |
| SRR2967015 | Control (root) | 8.053 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 7.831 |
| SRR9715740 | Leaf | 12.862 |
| SRR9715741 | Leaf | 8.863 |
| SRR9715739 | Root | 2.334 |
| SRR9715742 | Root | 3.872 |
| SRR9715743 | Root | 3.653 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 6.971 |
| SRR8749028 | MeJA induced 9h | 3.272 |
| SRR8749029 | MeJA induced 9h | 3.459 |
| SRR8749030 | Uninduced | 3.399 |
| SRR8749031 | Uninduced | 3.336 |
| SRR8749032 | Uninduced | 2.347 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 13.018 |
| SRR8400027 | Control - Root | 14.252 |