Gene detail

Gene detail information of Glyur000827s00023981

Functional Annotation

Database	Orthologs	Annotation
TAIR	AT4G20850.1	tripeptidyl peptidase ii
NR	XP_006587312.1	PREDICTED: tripeptidyl-peptidase 2-like isoform X1 [Glycine max]
COG	YP_004270520.1	Tripeptidyl-peptidase II [Planctomyces brasiliensis DSM 5305]
Swissprot	tr\|F4JVN6\|TPPII_ARATH	Tripeptidyl-peptidase 2
trEMBL	tr\|I1L362\|I1L362_SOYBN	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA09G25250.1}

Sequence

Transcript Sequence

>Glyur000827s00023981.1
CCCGAAATTACCAAAACACCCTCACCTCCCTCGCAATTAAATTCCAAAACGACCACACTCCTATATTTAAATTCCCCAAGTTACCCTCCCCTCTCATTATCAATATCATCACTCCCAAGAAGCTCACACTCATCATCACACACTACAAAGCAACGATCATCACGCAAAGAAAGAGCTTCGAACACCACCACCACCACCACCACCACCACCACCATCGGAAGAAGAAGAAGAACGCTTCTTCTGGATTGTTCCGAAGGCAATGCCTTGCTCTTCCTTCACTTCTACCAGTGGTGGCGATAACAACAACAACAGTAACGAGAATAAGAAGAAGATAAACGATGGCGATTCTTCTTCTCTCCGCGATTTCAAGCTGAACGAGTCAACCTTCTTGGCTTCACTCATGCCGAAGAAAGAAATCGGNGTAGATCGATTCCTCGATGCTCACCCTAACTACGATGGTCGCGGTGCTCTCATCGCTATCTTCGATTCTGGTGTAGACCCGGCTGTTGATGGGTTACAGGTTACCTCAGATGGGAAACCGAAAATTCTTGATGTCATTGATTGCACTGGGAGTGGTGATATTGATACCTCAAAGGTCGTGAAGGCTGATGCTGATGGTTGTATTTGTGGGGCTTCAGGGGCATCTATGGTTATCAATACTTCATGGAAAAATCCTTCTGGTGAATGGCACGTTGGTTATAAATTGGTTTATGAGCTCTTTACAGAAGATTTGACTTCTCGTTTGAAGAAAGAAAGAAAGAAAAAGTGGGATGAGAAAAACCAGGAGGAAATTGCGAGGGCTGTAAAACAGCTCGATGATTTTGATCAGCAACACATAAATGTGGAGGATGCAAAACATAAGAGAGCTCGTGAAGATCTCCAAAATAGGCTTGATCTTCTGAGAAAGCAATCTGAGAACTATGATGATAAAGGCCCTGTCATAGATGCTGTTGTCTGGCATGATGGAGAGGTCTGGAGGGTCGCCCTTGACACACANAGTCTTGAGGATGATCCGGGTTGTGGGAAGCTTGCTAATTTCGTGCCTTTAACTAATTATAGGATCGAGAGGAAGCATGGCGTCTTCAGCAAATTAGATGCTTGTACATTTGTTGTTAATGTGTATAATAATGGGAATGTCCTAAGTGTTGTAACAGACTGTTCTCCCCATGCCACCCATGTTGCTGGTATAGCTGCTGCTTTCCACCCGAAGGAGCCCTTGTTGAATGGAGTTGCACCTGGCGCACAATTAATATCTTGTAAAATTGGGGATTCTCGCTTGGGTTCAATGGAAACTGGAACTGGTTTGATTCGGGCGCTGATAGCTGCTGTGGAGCATAAATGCGATCTTATCAATATGAGTTATGGTGAAGCAACATTGCTGCCAGACTATGGACGCTTTGTTGACCTTGTGAATGAAGTGGTGAACAAGCATCGTCTGATATTTGTCAGCAGTGCCGGTAATAGTGGGCCAGGATTGAGCACTGTTGGTGCACCTGGCGGTACATCTTCTAGTATCATCGGCGTTGGTGCATATGTTTCTCCAGCTATGGCTGCTGGTGCTCATTGTGTTGTTGAACCTCCATCAGAGGGGCTTGAATACACTTGGTCTAGCCGAGGACCAACGGCTGATGGAGACCTTGGTGTCTGTATAAGTGCTCCTGGTGGTGCTGTTGCTCCTGTTCCTACGTGGACTCTTCAACGGCGTATGCTCATGAATGGGACTTCAATGGCATCACCATCAGCGTGTGGAGGAACTGCATTGCTCATAAGTGCAATGAAGGCTGAGGGAATTCCTGTGAGTCCATATAGTGTGAGGAAGGCTCTTGAGAATACCTCAGTTCCCATTGGTGATTTACCTGAAGATAAATTATCCACTGGACAAGGGCTTATGCAAGTTGACAAGGCTTTTGAATATATACAGAAGTGTCAAAATTTTCCATGTGTTTGGTATCAAATAAAGATCCAGCAATCTGGAAAAACAAATCCTTCATCACGAGGCATCTACCTTAGGGAGCCTAGTGCTTGTCGACAATCTACTGAGTGGACGGTGCAAGTTAGTCCAAAGTTTCATGAAGATGCCAACAACTTTGAGGAATTGATTCCATTTGAGGAATGCATTGAGTTATATTCTACTGAAAAGACTGTTGTGAAGGCCCCTGATTATGTACTGCTCACTCATAATGGTCGCACCTTTAATGTAGTAGTGGATCCTTCCAATCTATGTGATGGTCTTCATTATTTTGAGATCTATGGTATTGACTGTAAAGCTCCATGGCGTGGTCCTCTTTTCAGAATTCCAATTACCATAACAAAGTCCAAGGCTTTAACTAACCAGCCTCCACAAGTTTCATTTTCAAATATGTTATTCCAGCCAGGCCATATAGAAAGGAGATACATAGAAGTGCCACACGGTGCATCTTGGGCTGAAGCAACAATGAAAACATCAGGATTTGACACAGCTAGAAAATTTTTTGTGGACGCAGTTCAGATATGCCCATTGCAAAGACCTCTGAAATGGGAGAATGTGGTAACTTTTGCTTCTCCGGCTGCCAAAAGCTTTGCCTTTAGGGTAGTAAGTGGTCAGACATTGGAACTAGTAATTGCTCAGTTTTGGGCAAGTGGCATAGGGAGTCATGGGACTGCCAGTGTGGATTTTGAGATTGTGTTTCGTGGAATAAAAGTCAATCAAGAAGAAGTTATACTGGATGGCAGTGAAGCACCAGTCAAAATTGATGCTGAAACACTACTGGCATCTGAGGAACTTGCTCCAGTTGCTACTCTAAACAAGATTAGGGTTCCATATCGACCAATAGATTCTAAGATTTGTGCACTTTCAACTGATCGTGACAAACTTCCCTCTGGAAAGCAGATACTGGCACTGACTTTGACCTACAAGGTTAAATTGGAAGATGGAGCTCAAGTAAAACCTCACATACCATTGCTAAATGACCGGATATATGACACTAAATTTGAGTCTCAATTTTATATGATTTCTGACTCAAACAAGCGCATATATTCTTGTGGTGATGTTTATCCAAGCTCTTCAAATCTTCCGAAGGGAGAATATAATTTACAGCTATATTTGAGGCATGAAAATGTGCAGATTTTGGAAAAGATGAGGCACTTGGTGTTATTCATTGAGCGAAATTTGGAAGAGAAGGATGTCATTCGGTTAAGTTTTTTCTCTCAACCTGATGGTCCTCTGATGGGAAATGGTTCCTTTAAGTCCTCATTGTTAGTTCCGGGTATGAAAGAAGGATTATATCTTGGTCCACCACAAAAAGATAAGCTTCCCAAGAATTCTCCACAAGGATCTATATTGGTAGGGGCAGTTTCGTATGGGAAACTATCATTTGCTCATCCAGGGGAGAATAAAAACCCAGAAAAGCACCCTGCTTCATGTCGGATTTCTTATGTAGTTCCTCCAAATAAGGTTGATGAGGACAAGGGAAAAGGTTCCTCCTTATCTTCCAAGAAAACTGTTTCTGAACGTATAAAAGAAGAGGTAAGAGATGCAAAAATAAAAGTTCTAGGAAGCCTGAAACAAGAAACTGATGAAGAGCGCTTGGAGTGGAAAGAGCTAGCCACCTCACTTAAATCGGAATATCCAAAGTACACTCCATTGCTTGCAAAGATTTTGGAAGGTTTAGTTTCTAGGAGTAATATCAAAGACCAAATCCATCATGATGAAGAGGTGATAGATGCAGCAAATGAGGTGATTGACAGTATTGACCGGGAAGAGTTGGCAAAATTTTTTGCACTAAAAAATGATCCAGAAGATGAGGAAGCAGAGAATATCAAGAAAAAGTTTGAGTCTACCCGAGACCAGTTAGCAGAGGCACTGTACCAGAAGGGGCTTGCGTTGGCAGAGATAGAGTCTTTAAAGTTGGCAGACTTGACTTGGTGTATATTGTCAAAGGACGTAGATAAGTCCTCGGCTTTGGCTGCAACAGAAGGTGTAGAAAAAGATGTGCAATCTGCTGATGATGACCGACATCCAGACTTGTTCGAAGAGAATTTTCGAGAACTGAAGAAATGGGTTGATGTGAAGTCATCCAAATATGGAATCCTCTTGGTAACTCGTGAGAGGCGTTCTCAAAGGCTTGGGACAGCATTGAAGTCCATCATCGCACCTGACCTTCACCCAAGCCCTCCATTTCCAGCGACCTGCTCCTCTGTCTCCGGCGACCTTTTCTGCTCAACTCCGGTACTGTGTGACGTAATTCAAGATGATGCAGAGCCTGCAAAGAAGAAATTCTATGAACTAAAGCTCTCTTTGCTTGATGAGATTGGATGGACACATTTAGCTACATATGAGAGACAGTGGATGCTTGTACGTTTCCCTCCAAGCTTGCCCCTTTTCTAGGGCCCACCTGATGGGAAGTATGTTGGATAGCAAATGTTAAAGAATTCAGAGCCATGTCCCTCCTCCTCAATAATTTGCTTGTGAGGACAAATCATGTAACATTATTTGACCTTTCATGTATGACCTATCCTTTTCATTTTGTACTCATCTTGGCCTAGCTATCTGTCATATGGTGTGGGAACTTTGCCATTCAGGTCTATTGCTAATCCTTCAGTGTGGCTGCCACATCAACAGATCGCTAATCGCCTTTACATTAATTAGGTAATTACAGAATAAAGATAGTTTTCACTCGTCTTTTCTTGATTGTTGTTCCCATTAGTTATTTTAATTTAGAATTCAGTGTCTCCAGATTGATATTTGATAACTGGTAGTATGTTAGTATAATTACATACCAAGTCCCAAACCCC

Protein Sequence

>Glyur000827s00023981.1
MPCSSFTSTSGGDNNNNSNENKKKINDGDSSSLRDFKLNESTFLASLMPKKEIGVDRFLDAHPNYDGRGALIAIFDSGVDPAVDGLQVTSDGKPKILDVIDCTGSGDIDTSKVVKADADGCICGASGASMVINTSWKNPSGEWHVGYKLVYELFTEDLTSRLKKERKKKWDEKNQEEIARAVKQLDDFDQQHINVEDAKHKRAREDLQNRLDLLRKQSENYDDKGPVIDAVVWHDGEVWRVALDTXSLEDDPGCGKLANFVPLTNYRIERKHGVFSKLDACTFVVNVYNNGNVLSVVTDCSPHATHVAGIAAAFHPKEPLLNGVAPGAQLISCKIGDSRLGSMETGTGLIRALIAAVEHKCDLINMSYGEATLLPDYGRFVDLVNEVVNKHRLIFVSSAGNSGPGLSTVGAPGGTSSSIIGVGAYVSPAMAAGAHCVVEPPSEGLEYTWSSRGPTADGDLGVCISAPGGAVAPVPTWTLQRRMLMNGTSMASPSACGGTALLISAMKAEGIPVSPYSVRKALENTSVPIGDLPEDKLSTGQGLMQVDKAFEYIQKCQNFPCVWYQIKIQQSGKTNPSSRGIYLREPSACRQSTEWTVQVSPKFHEDANNFEELIPFEECIELYSTEKTVVKAPDYVLLTHNGRTFNVVVDPSNLCDGLHYFEIYGIDCKAPWRGPLFRIPITITKSKALTNQPPQVSFSNMLFQPGHIERRYIEVPHGASWAEATMKTSGFDTARKFFVDAVQICPLQRPLKWENVVTFASPAAKSFAFRVVSGQTLELVIAQFWASGIGSHGTASVDFEIVFRGIKVNQEEVILDGSEAPVKIDAETLLASEELAPVATLNKIRVPYRPIDSKICALSTDRDKLPSGKQILALTLTYKVKLEDGAQVKPHIPLLNDRIYDTKFESQFYMISDSNKRIYSCGDVYPSSSNLPKGEYNLQLYLRHENVQILEKMRHLVLFIERNLEEKDVIRLSFFSQPDGPLMGNGSFKSSLLVPGMKEGLYLGPPQKDKLPKNSPQGSILVGAVSYGKLSFAHPGENKNPEKHPASCRISYVVPPNKVDEDKGKGSSLSSKKTVSERIKEEVRDAKIKVLGSLKQETDEERLEWKELATSLKSEYPKYTPLLAKILEGLVSRSNIKDQIHHDEEVIDAANEVIDSIDREELAKFFALKNDPEDEEAENIKKKFESTRDQLAEALYQKGLALAEIESLKLADLTWCILSKDVDKSSALAATEGVEKDVQSADDDRHPDLFEENFRELKKWVDVKSSKYGILLVTRERRSQRLGTALKSIIAPDLHPSPPFPATCSSVSGDLFCSTPVLCDVIQDDAEPAKKKFYELKLSLLDEIGWTHLATYERQWMLVRFPPSLPLF

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00827	22156	49807	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006508 proteolysis

molecular_function
GO:0004252 serine-type endopeptidase activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000827s00023981.1	PF00082.17	Peptidase_S8	72	550	1.30E-57
Glyur000827s00023981.1	PF12580.3	TPPII	824	1017	1.80E-64
Glyur000827s00023981.2	PF00082.17	Peptidase_S8	72	550	1.30E-57
Glyur000827s00023981.2	PF12580.3	TPPII	824	1017	1.70E-64

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	63.258
SRR1783600	control	63.508
SRR1783602	moderate drought stress	51.021
SRR1811619	moderate drought stress	50.531

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	40.847
DRR006520	Root Summer glycyrrhizin high producing strain	40.592
DRR006521	Root Winter glycyrrhizin high producing strain	14.031
DRR006522	Root Winter glycyrrhizin high producing strain	13.598
DRR006523	Root Summer glycyrrhizin low producing strain	30.682
DRR006524	Root Summer glycyrrhizin low producing strain	31.107
DRR006525	Leaf Summer glycyrrhizin high producing strain	25.265
DRR006526	Leaf Summer glycyrrhizin high producing strain	25.100

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	107.425
SRR2868004	Drought Stress (root)	100.769
SRR2967015	Control (root)	84.287

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	40.561
SRR9715740	Leaf	54.273
SRR9715741	Leaf	44.985
SRR9715739	Root	9.515
SRR9715742	Root	61.518
SRR9715743	Root	53.465

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	51.224
SRR8749028	MeJA induced 9h	57.346
SRR8749029	MeJA induced 9h	41.381
SRR8749030	Uninduced	15.440
SRR8749031	Uninduced	18.538
SRR8749032	Uninduced	21.791

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	80.573
SRR8400027	Control - Root	78.851