Gene detail information of Glyur000826s00029635 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G03120.1 | 2.00E-150 | signal peptide peptidase |
| NR | XP_004501187.1 | 0 | PREDICTED: signal peptide peptidase-like [Cicer arietinum] |
| Swissprot | tr|O81062|SIP_ARATH | 0 | Signal peptide peptidase |
| trEMBL | tr|I1K992|I1K992_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA06G08620.4} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00826 | 13738 | 19773 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000826s00029635.1 | PF04258.8 | Peptidase_A22B | 50 | 317 | 3.60E-84 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 31.758 |
| SRR1783600 | control | 32.440 |
| SRR1783602 | moderate drought stress | 27.956 |
| SRR1811619 | moderate drought stress | 27.862 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 30.150 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 30.013 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 53.341 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 52.046 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 31.205 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 31.153 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 14.911 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 14.653 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 76.077 |
| SRR2868004 | Drought Stress (root) | 69.751 |
| SRR2967015 | Control (root) | 65.782 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 32.167 |
| SRR9715740 | Leaf | 25.058 |
| SRR9715741 | Leaf | 39.418 |
| SRR9715739 | Root | 34.063 |
| SRR9715742 | Root | 55.232 |
| SRR9715743 | Root | 48.849 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 142.437 |
| SRR8749028 | MeJA induced 9h | 104.150 |
| SRR8749029 | MeJA induced 9h | 132.373 |
| SRR8749030 | Uninduced | 151.532 |
| SRR8749031 | Uninduced | 219.537 |
| SRR8749032 | Uninduced | 121.357 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 39.958 |
| SRR8400027 | Control - Root | 40.219 |