Gene detail information of Glyur000824s00026007 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G07010.1 | 8.00E-118 | sulfotransferase 2A |
| NR | AES68675.2 | 0 | sulfotransferase [Medicago truncatula] |
| Swissprot | tr|Q8L5A7|SOT15_ARATH | 7.00E-146 | Cytosolic sulfotransferase 15 |
| trEMBL | tr|G7IVU2|G7IVU2_MEDTR | 0 | Sulfotransferase {ECO:0000256|RuleBase:RU361155} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00824 | 85613 | 87524 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000824s00026007.1 | PF00685.22 | Sulfotransfer_1 | 73 | 333 | 1.40E-66 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.488 |
| SRR1783600 | control | 3.517 |
| SRR1783602 | moderate drought stress | 1.183 |
| SRR1811619 | moderate drought stress | 1.175 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.793 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.786 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.520 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.221 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.774 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.871 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 46.018 |
| SRR2868004 | Drought Stress (root) | 42.161 |
| SRR2967015 | Control (root) | 43.095 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.326 |
| SRR9715740 | Leaf | 1.199 |
| SRR9715741 | Leaf | 1.255 |
| SRR9715739 | Root | 6.063 |
| SRR9715742 | Root | 4.913 |
| SRR9715743 | Root | 4.829 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 12.113 |
| SRR8400027 | Control - Root | 11.743 |