Gene detail information of Glyur000824s00026006 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G28230.1 | 6.00E-26 | |
| NR | AFK37847.1 | 3.40E-97 | unknown [Medicago truncatula] |
| trEMBL | tr|I3SC55|I3SC55_MEDTR | 1.00E-97 | Uncharacterized protein {ECO:0000313|EMBL:AFK37847.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00824 | 75451 | 76644 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 6.906 |
| SRR1783600 | control | 6.966 |
| SRR1783602 | moderate drought stress | 3.981 |
| SRR1811619 | moderate drought stress | 3.640 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 10.966 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 10.904 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.877 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.730 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.698 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 5.378 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.511 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.475 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 16.468 |
| SRR2868004 | Drought Stress (root) | 7.142 |
| SRR2967015 | Control (root) | 10.306 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.348 |
| SRR9715740 | Leaf | 1.698 |
| SRR9715741 | Leaf | 1.224 |
| SRR9715739 | Root | 3.718 |
| SRR9715742 | Root | 5.993 |
| SRR9715743 | Root | 2.757 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 17.893 |
| SRR8749028 | MeJA induced 9h | 11.021 |
| SRR8749029 | MeJA induced 9h | 5.082 |
| SRR8749030 | Uninduced | 0.199 |
| SRR8749031 | Uninduced | 0.157 |
| SRR8749032 | Uninduced | 0.165 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 12.684 |
| SRR8400027 | Control - Root | 9.871 |