Gene detail

Gene detail information of Glyur000824s00026003

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT3G14470.1	8.00E-171	NB-ARC domain-containing disease resistance protein
NR	XP_004498673.1	0	PREDICTED: putative disease resistance RPP13-like protein 1-like isoform X1 [Cicer arietinum]
COG	YP_001660791.1	6.00E-15	apoptotic protease-activating factor 1 like [Microcystis aeruginosa NIES-843]
Swissprot	tr\|Q9LRR4\|R13L1_ARATH	0	Putative disease resistance RPP13-like protein 1
trEMBL	tr\|G7IYQ9\|G7IYQ9_MEDTR	0	LRR and NB-ARC domain disease resistance protein {ECO:0000313\|EMBL:AES68721.1}

Sequence

Transcript Sequence

>Glyur000824s00026003.1
ATGGTGTCTTTGCACATAAGTAATTGTGATAGTTGTTCATTCTTGCCACCCATTGGGCAATTACATAGCCTAAAAGAACTCCATATTGATGGGATGAGATCAGTAAGGAGTGTTGGTGGTGAATTCTATGGAAAGTGGGAGGAATGGAAATTGATTGGAGGCACAGCCACAGAATTTCCTAGTCTTAGACGTCTGTCACTGAAAAGATGTCCCAAACTGAAAGAGATCACACCCACCAACCTTTCTTCCTTGACTGAGCTTGAGTTAAGCGAATGTCCTCTATTGGTGGAGTCAGGGCAGCATTCAGATGATAATGATAACAGCAACGCTACAATGCGGCCATCATCAGATGTGTTCAGCCAATTGAAGCTGCCTCCTCTCAATTCTCTTCGAAAGTTGACGATTGAAGACTTTCCCTCTTTGACGTCCTTCCCAAGAGACGGTCTACCCAAAACCTTACAATCTCTCACTATCCATGGTTGTCAGAATCTGAAACTCCTTCCTTATGAATCGCTACACAATTACACATCACTTGAGGATTTGAAAATATATGACAGTTGTAATTCAATGACATCCTTTACCTTGGGCTCTCTCCCTGTCCTCAAAAGTCTGTGTATTGGTTGTTCTGTGAATTTGAAATCGATATTGATTGCAGAAGATGCGTCGTCGCATATTCTCTCGTTTCTTAGAAGCATCACAATATTTTTTTGTAATGAACTGGAGTCATTTTATCCTTCAGGTGGATTGCCCATTCCTAACCTCATTCGTCTCAACGTGCTTCATTGTGAGAAGCTTCATTCACTGCCAGAACCAATTAATGCCTTCCCCACCCTTCAAGAATTAACTCTAGCTGGACTTCCAAATCTGCAATATTTTGCTAAAGAGGGTTTGCCTATCAATTTACGGGAACTGTTTATTGCCAAGCTTGGAGGGGATCCATGGAATGCAGCATCTATTACTACTGAGTGGGGTTTGGAACGTCTCACTTGTCTTTTGGAGTTGAAAACTATGGGTGATGATATTGTGAAGGCGCTGATGAGAAGGGAAGTGCCATTGCTACTCGTTTCTCTGGTGACCCTAATGATCTTTAATCTGTATGATATAGAATGCTTGGATGGGAAGTGGCTTTGCCATCTTACCTCTCTCCAAAACCTGGAGATTCATTACGCTCCCAAGCTCAAGTCGTTGCCAGCAGAGGGATTGCCTTCCTCTCTTTCCGTACTGCATATCTCTGGCTGCCCATTGCTGGAAGCAAGTTTGCGGAGGAAGCGAGGGAAAGAGTGGCATAAAATTGCTCACATTCCCACCATACTGAACCAGAGTATACTCTACACTACACTGCTCTTTCTTCTTGTGAACCTGTTCTTGTTTTCCTATTCTTCTGGTGAACTAAGGAACTTGATGGCCACTATTGTTGCAGAAGCGTTCCTCTCAGCTTCTGTGGAGCTGTTGTTAAAAAAAATCGGTTCTGGTGAGTTCGTGGACATCTTTCGGAGCACCAAGCTTGATAAGTCACTCTTGGAAAAGATGGAAACAACACTGCTGAGTCTTCAAGCTGTGCTAAATGATGCTGAGGAGAAACAGATCACAAATTCCGCTGTGAAGGAATGGCTGGATAAGCTGAGAGATGCTGTCTTTGAAGCTGAGGATTTGTTCGATGAAATCAACACCGAGGCATTGCGATGCAAAGTGGAAGCCGAGTATGGAAGCCAAACTGTTAGTGCTAAGGTGCAGAACATCCTTTCTTCTCGTTTCAAACGGTTTTATGGGGTGATCAATTCTAAAATGCAAGCATTGTTTGAAAGATTGGAACACTTTGCACAGAAAATACCCATTCTTGATCTGAAAAAAGGTGTTTCCGGCAGTGTTTGGCATGGAACTCCTACAGGTTCTGTGGTAGATGAATCTTCTATTTGTGGCAGAGATGATGACAGAAAGAAACTTAAAGAGTATCTATTATCAAATGTTAGTGATGGTGGCAGTAAAATAGGAGTGATTTCCATTGTGGGCATGGGAGGGTTGGGTAAGACAACCCTTGCCAAACTCCTATACAATGATCCGGAAGTGAAAGAGAAGTTTAAACTGAAAGCGTGGGCACATATCTCAAAGGATTTNGATGTTTGCAGGTTCACTAAAACCCTCCTTGAATCTGTCACTTCAAAGGCAATCGATGCTAATAACCTGAATACTCTACAAGTGCAACTGCAGCAAAGTCTAAGTCATAAGAAATTTTTGCTAGTATTGGATGACATATGGGATGNAAGCTATGTCGATTGGAACAATTTAAGGGACATCTTTAATTCTGGGGAAATAGGAAGTAAAATCATCATCACAACACGAGATGAAAGTGTTGCAAGGGACATGCAAACCTCTTTTATCTACCGTCTGCCGTCTCTGGCAAGTGAAGATTGTTGGTATTTACTTGCCAAACATGCATTTGGAGAAAATAATTGCAGCAAACAGTCCAACCTGGAAGCTATTGGTAGAGAAATCGCGAAAAAGTGTGATGGCTTACCATTAGCTGCAGTAGCACTCGGGGGTCTTCTTCACAAAAAATTGTCGCCAGATCACTGGAATCATGTACTGAAAAGTAACATTTGGGATTTGCCAGATGTTGAGGTGCAACCGGCTCTACGATTAAGCTATCACTACCTTCCTGCTCCTTTAAAACAGTGTTTTTCTTATTGTTCAATTTTTCGGAAGAACTATGTCTTGGAAAAAAATATGGTAGTGCAGTTGTGGATTGCAGAAGGCTTGGTACATCAGTCCAAGAGCCAAAAAAGCATGGAAAAAGTAGGAGAAGAATACTTTGACGAACTAGTGTCAAGGTCGATGATACAATGGCATTCTGTTGATGGGGAAAAAACCTTTGAAATGCATGATCTCCTCCATGATTTAGCCACAACGGTTTTATCCCCATACTATATGAGGCTAGACGAGCAGAAGGGGCATGTAAGTCTTGAAAGAGTACGCCATTTGTCGTACAATAGAGAGCAAAATGACTTACATTGTAAATTTGATACAATATTGGATGGAGCAAAAGGTCTACGAACGTTCCTACCATTACAAAGAGAAGGTTACTGGAACTACTTATCGAACAAGGTAGTAGGTGACTTGTTGCCAGCAATGAAAAAGTTACGCGTGTTGTCATTGTCAGAATACAGGAATCTCACTGAGTTGCCCAAATCTATTGGGAATTTGATATACCTGCGATACTTAAATCTCTCCAGAACCGGTATTGAAAGGTTGCCTTCTGAAACATGCAGACTTTACAATCTGCAGACCTTGTTGTTGTCAGGCTGTAGGGAACTCGCGGAATTGCCAACAGACATTGGGAAATTGGTGAATCTACGCCACCTTGACATCAGTGGCACTGACGTGAAGGAGATGCCTAAACAAATAGCGAAGCTGCAAAAGCTTCAAACTTTGTCTGACTTTGTTGTCAGCAAACAGCATGACGGATTGAAGGCCGCAGAGCTAGGAAAATTTCACCATCTACAAGGGAAGCTGTCCGTCTCAGGGCTACAAAATATTACCGACCCCTCAGATGCTTCTCGAGCAAATTTGAAGAAAAACGAACAGATTGACGATTTGGAACTCCAGTGGGATCAAATTGGAGCTCAACAAGGTTCAGAAATTCAAAGTCTTGTACTTGAACGGTTGTGGCCCTCAACAAGTTTGAAGAATCTCAACATCGAAGGCTATGGTGGAACCAGCTTTCCAAATTGGTTGGGTGATTATGCATTTGGCAACATGGTGTGTTTGCGCATAAGCAATTGTGGTAGTTGTTCGTTGCTGCCACCCCTTGGGCAATTACACAGCCTGAAAGAACTCCATATTATGCGGATGAAATCATTAAAGAGTGTTGGTGGTGAATTTTATGGAAGTGGTAATAGTCCTTCATTTCAACCATTTCCCTCCTTGGAGACACTGACATTTGACAACATGCCTGAGTGGGAGGAATGGAAAACGACTGGAGACACAGCCGTGGAGTTTCCCAGTCTTAAACGTCTGTCACTGACAAAATGTCCCAAACTGAAAGAGATCACACCCAGCAACCTTTCTTCCTTAACTGAACTTGAGTTATGGCGATGTCATCAATTGGTGGAGTCAGGGCAGCATTTAGATGATAACAACAATGTTACAAGGCAGCCATCATCAGATGTATTCGGCCAATTGAAGCTGCCTCCTCTCAATTCTCTTCGAAAGTTGACGATTGAAGACTTTCCCTCTCTGACGTCCTTCCCAAGAGACGGTCTGCCCAAAACCTTACAATCTCTTACTATCAAGGATTGTCAGAATCTAGATTTCCTTCCTCTTGAATCCCTACACAAGTACACGTCACTCGAGGATCTACAAATACGTAAAAGCTGCAATCCGATGACATCCTTTTCGTTGGGCTCTCTCCCTGTCCTCAAAAGTCTTCGACTTGATAATTGTAATGGTCTGAAATCGATATTGATTGTAGAAGATGCGTCATTGCAGAGTCTCTCGTTTCTTACAAGCATCGAAATATGGAATTGTGATGAACTGGAGTCATTCACCCTGGGTGGATTGCCCATTCCAAACCTCATTCATCTCGTGGTGCGGCAGTGCGAGAAGCTCCATTCACTGCCAGAACTAATGATCACCTTCCCCAGCCTTGAAAATTTAAGCCTGGTTGGCCTTCCAAATCTGCAATCTTTTGNCAAAGAGGGTTTGCCAATCAATTTACGGGGACTGGCTGTTGGAGTAGTTGGAGGGATTACTGAGTTGGGTTTGGAACGTCTCACTTGTCTTACATGGTTGACTATTGAGGGTGACGATATGGTGAATGCACCGATGAGAACCGAAAGGCCATTGCTACCCACTTCTCTCGTAACTCTTGACATCTCTAATCTGCATGAGATAGAATGCTTGGATGGGAAGTGGCTTCACCATCTCACCTCTCTCCAAATGCTTTACTTTCATGATGCTTTGAATCTCAAGTCGTTACCAGAAGAGGGATTGCCTTCCTCTCTTTCCGAACTGTATATCTGGGGTTGTCCGAAGCTCAAGTCGTTGCCAGAAGAGGGATTGCCTTCCTCTCTTTCCGAACTGTATATCTGGAACTGTTGGAAGCTCGAGTCGTTGCCAGAAAAGGGATTGCCTTCCTCTCTTTCCATGCTGCGTATAAAGAATTGTCCATTGCTGGAAGCAAGTCTGCGGAGGAGGAAGCGAGGGAANGAGTGGCATAAAGTTTGTATTTGCCATGACACAACTCATCCTATATTTGATACATTCAATAAAGGAGGATCCCAGCCATTCAAGGAAGAGAAGAGAGCCATGTGGGCAAGAGTTTAG

Protein Sequence

>Glyur000824s00026003.1
MVSLHISNCDSCSFLPPIGQLHSLKELHIDGMRSVRSVGGEFYGKWEEWKLIGGTATEFPSLRRLSLKRCPKLKEITPTNLSSLTELELSECPLLVESGQHSDDNDNSNATMRPSSDVFSQLKLPPLNSLRKLTIEDFPSLTSFPRDGLPKTLQSLTIHGCQNLKLLPYESLHNYTSLEDLKIYDSCNSMTSFTLGSLPVLKSLCIGCSVNLKSILIAEDASSHILSFLRSITIFFCNELESFYPSGGLPIPNLIRLNVLHCEKLHSLPEPINAFPTLQELTLAGLPNLQYFAKEGLPINLRELFIAKLGGDPWNAASITTEWGLERLTCLLELKTMGDDIVKALMRREVPLLLVSLVTLMIFNLYDIECLDGKWLCHLTSLQNLEIHYAPKLKSLPAEGLPSSLSVLHISGCPLLEASLRRKRGKEWHKIAHIPTILNQSILYTTLLFLLVNLFLFSYSSGELRNLMATIVAEAFLSASVELLLKKIGSGEFVDIFRSTKLDKSLLEKMETTLLSLQAVLNDAEEKQITNSAVKEWLDKLRDAVFEAEDLFDEINTEALRCKVEAEYGSQTVSAKVQNILSSRFKRFYGVINSKMQALFERLEHFAQKIPILDLKKGVSGSVWHGTPTGSVVDESSICGRDDDRKKLKEYLLSNVSDGGSKIGVISIVGMGGLGKTTLAKLLYNDPEVKEKFKLKAWAHISKDXDVCRFTKTLLESVTSKAIDANNLNTLQVQLQQSLSHKKFLLVLDDIWDXSYVDWNNLRDIFNSGEIGSKIIITTRDESVARDMQTSFIYRLPSLASEDCWYLLAKHAFGENNCSKQSNLEAIGREIAKKCDGLPLAAVALGGLLHKKLSPDHWNHVLKSNIWDLPDVEVQPALRLSYHYLPAPLKQCFSYCSIFRKNYVLEKNMVVQLWIAEGLVHQSKSQKSMEKVGEEYFDELVSRSMIQWHSVDGEKTFEMHDLLHDLATTVLSPYYMRLDEQKGHVSLERVRHLSYNREQNDLHCKFDTILDGAKGLRTFLPLQREGYWNYLSNKVVGDLLPAMKKLRVLSLSEYRNLTELPKSIGNLIYLRYLNLSRTGIERLPSETCRLYNLQTLLLSGCRELAELPTDIGKLVNLRHLDISGTDVKEMPKQIAKLQKLQTLSDFVVSKQHDGLKAAELGKFHHLQGKLSVSGLQNITDPSDASRANLKKNEQIDDLELQWDQIGAQQGSEIQSLVLERLWPSTSLKNLNIEGYGGTSFPNWLGDYAFGNMVCLRISNCGSCSLLPPLGQLHSLKELHIMRMKSLKSVGGEFYGSGNSPSFQPFPSLETLTFDNMPEWEEWKTTGDTAVEFPSLKRLSLTKCPKLKEITPSNLSSLTELELWRCHQLVESGQHLDDNNNVTRQPSSDVFGQLKLPPLNSLRKLTIEDFPSLTSFPRDGLPKTLQSLTIKDCQNLDFLPLESLHKYTSLEDLQIRKSCNPMTSFSLGSLPVLKSLRLDNCNGLKSILIVEDASLQSLSFLTSIEIWNCDELESFTLGGLPIPNLIHLVVRQCEKLHSLPELMITFPSLENLSLVGLPNLQSFXKEGLPINLRGLAVGVVGGITELGLERLTCLTWLTIEGDDMVNAPMRTERPLLPTSLVTLDISNLHEIECLDGKWLHHLTSLQMLYFHDALNLKSLPEEGLPSSLSELYIWGCPKLKSLPEEGLPSSLSELYIWNCWKLESLPEKGLPSSLSMLRIKNCPLLEASLRRRKRGXEWHKVCICHDTTHPIFDTFNKGGSQPFKEEKRAMWARV

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00824	53220	66364	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

molecular_function
GO:0043531 ADP binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000824s00026003.1	PF00931.17	NB-ARC	649	924	2.90E-76

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	5.307
SRR1783600	control	5.176
SRR1783602	moderate drought stress	6.190
SRR1811619	moderate drought stress	6.050

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	8.084
DRR006520	Root Summer glycyrrhizin high producing strain	8.308
DRR006521	Root Winter glycyrrhizin high producing strain	1.325
DRR006522	Root Winter glycyrrhizin high producing strain	1.283
DRR006523	Root Summer glycyrrhizin low producing strain	7.882
DRR006524	Root Summer glycyrrhizin low producing strain	7.496
DRR006525	Leaf Summer glycyrrhizin high producing strain	5.638
DRR006526	Leaf Summer glycyrrhizin high producing strain	5.649

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	2.006
SRR2868004	Drought Stress (root)	1.830
SRR2967015	Control (root)	2.405

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	0.628
SRR9715740	Leaf	2.999
SRR9715741	Leaf	1.278
SRR9715739	Root	0.754
SRR9715742	Root	2.749
SRR9715743	Root	2.068

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	1.986
SRR8749028	MeJA induced 9h	2.348
SRR8749029	MeJA induced 9h	1.878
SRR8749030	Uninduced	3.124
SRR8749031	Uninduced	0.826
SRR8749032	Uninduced	0.957

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	2.656
SRR8400027	Control - Root	4.739