Gene detail information of Glyur000824s00025998 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G80190.1 | 2.00E-67 | partner of SLD five 1 |
| NR | XP_007148661.1 | 1.74E-107 | hypothetical protein PHAVU_005G004200g [Phaseolus vulgaris] |
| trEMBL | tr|V7BUE2|V7BUE2_PHAVU | 6.00E-108 | Uncharacterized protein {ECO:0000313|EMBL:ESW20655.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00824 | 21568 | 23481 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.930 |
| SRR1783600 | control | 2.064 |
| SRR1783602 | moderate drought stress | 1.565 |
| SRR1811619 | moderate drought stress | 1.507 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.339 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.169 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.197 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.192 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.814 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.878 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.495 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.373 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 7.405 |
| SRR2868004 | Drought Stress (root) | 5.108 |
| SRR2967015 | Control (root) | 4.481 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.650 |
| SRR9715740 | Leaf | 0.113 |
| SRR9715741 | Leaf | 0.718 |
| SRR9715739 | Root | 0.968 |
| SRR9715742 | Root | 0.764 |
| SRR9715743 | Root | 0.649 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 15.442 |
| SRR8749028 | MeJA induced 9h | 4.964 |
| SRR8749029 | MeJA induced 9h | 8.414 |
| SRR8749030 | Uninduced | 8.377 |
| SRR8749031 | Uninduced | 7.075 |
| SRR8749032 | Uninduced | 4.187 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 7.381 |
| SRR8400027 | Control - Root | 5.696 |