Gene detail

Gene detail information of Glyur000823s00027915.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G55090.1	0	carbon-nitrogen hydrolase family protein
NR	XP_003525329.1	0	PREDICTED: glutamine-dependent NAD(+) synthetase-like isoform X1 [Glycine max]
COG	YP_003385502.1	2.00E-74	NAD+ synthetase [Spirosoma linguale DSM 74]
Swissprot	tr\|Q9C723\|NADE_ARATH	0	Glutamine-dependent NAD(+) synthetase
trEMBL	tr\|I1K669\|I1K669_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA05G36610.1}

Sequence

Transcript Sequence

>Glyur000823s00027915.1
ACAATATAACCCGTCCAAGGGTCCGGGAGTGAGTGAATTGAATTGTAAGTGCCTCTCGGGTGGGTATCTCCTTTGCTTTTTCAGTCTTCAATTTCATCGTAGAATCAAAGCCAAACACCATAGTTAGTCCATACGAATACCATATATAAAAAGGCTCCCCTCGCATCGCAATTTTCACTACACCAACAACAAACAATCCTTGTAACTCACGAAATTGGCATTCCATTTCAAAAAAAATCCCTCTTTCTGTTTGTGTTTGCGTCGTGGTACGATGAGGCTGTTGAAAGTGGCTNCTTGCAATCTGAACCAATGGGCTATGGACTTCGATTGCAACGCAAAGCAAATCAAAGAATCCATAGCCAAGGCCAAACATGCCGGCGCCGTCATCAGGCTCGGTCCCGAGCTCGAGATTCCCGGTTATGGCTGCGAAGATCACTTCCTAGAGCTCGACACTGTTTCCCATTCCTTTGGCATGCCTGTTATCAAAGGCTCCGAGAGGTACAATTGTCAGGTTNTGTGTCTCAATCGAAGGATCATTATGATACGGCCAAAGATGTGGCTTGCAAACGATGGCAATTATAGAGAACTTCGATGGTTCACTGCCTGGAAGCAAAGGGACCAACTCGTGGATTTTCAGCTTCCCAGTGGAATATCTGAGGCATTGGGCCAAACATCAGTTCCCTTTGCTATTGCGGCTGAAGTTTGTGAAGAGCTTTTTACCCCATCACCCCCTCATTCTGAGCTTGCATTGAATGGGGTTGAAGTGTTTATGAATGCAAGTGGAAGTCACCACCAACTTAGNAAGCTTGATGTTCGTCTTCGTGCTTTTATAGGTGCCACTCATACCCGTGGAGGGGTTTACATGTATAGCAATCACCAAGGCTGTGATGGCGGTCGCCTTTACTATGATGGCTGTGCCAGTGTTGTGGTAAATGGAGATCTTGTTGCTCANGGTTCCCAATTTTCTTTAAAGGATGTTGAGGTTGTCGTTGCTCAGATAGATCTAGATGTGGTTGCAAGCCTTAGAGGATCTTTAAGTAGCTTCCAAGAGCAAGCAAGTTGTAAAACCAAGGTTCCTTCAGTGGAAGTACCATACAGTCTCTGTCTTCCTTTTAACCTTAAAATACGCCTTTCTGTACCACTTAAGATAAAATATCACTCTCCTGAGGAGGAAATAGCATTTGGACCTGGTTGCTGGTTATGGGACTANTTGAGAAGAAGTGGAGCATCTGGTTTTCTGCTTCCTCTTTCTGGTGGAGCAGACAGTTCCTCTGTTGCTGCAATTGTTGGGTGCATGTGCCAGCTGGTTGTGAAAGAAATTGCAAATGGGGATGAACAAGTTAAAGCTGATGCAATACGAATCGGAAACTATAAAGATGGACAGTATCCTACAGACAGCAAAGAATTTGCTAAACGAATATTTTATACTGTGTTCATGGGAACTGAAAACAGTTCGGAAATGACAAGGTCACGAGCCAAGGTGCTGGCTGATGAAATTGGTTCATGGCACCTTGATGTTAGCATCGACGGAGTTATATCTGCTCTTTTGTCATTGTTCCAAACACTTACAGGAAAGAGACCGCGCTATAAGGTAGATGGTGGATCTAATGTTGAGAATTTAAGCTTGCAGAACATTCAAGCTCGAATCAGAATGGTGCTAGCTTTCATGTTAGCATCACTCTTGCCTTGGGTTCACAGCAAACCTGGGTTTTATCTTGTCTTGGGGAGCTCCAATGTGGATGAAGGCTCAGCAGATATAAATCCTATTGGTAGTATAAGTAAGCAGGACCTCCGGGCATTCCTGCGATGGGCAGCCATCCATCTTGGTTACTCATCTTTGGCAGATGTTGAAGCAGCTCCACCNACAGCTGAACTGGAGCCTATACGTTCTGACTACAGTCAGCTTGATGAAGTTGATATGGGAATGACTTACGAGGAACTATCAGTTTATGGAAGACTACGGAAAATTTTCCGTTGTGGTCCAGTTTCCATGTTCCAGAATCTATGCTACAGATGGGGTGCAAGATTGACTCCATCACAAGTAGCTGAAAAAGTAAAATACTTCTTCAAGTATTATTCTATCAATCGTCACAAAATGACTGTCATGACACCTTCCTATCATGCTGAGAGTTATTCACCAGAAGATAATAGGTTTGATCTTCGCCAGTTTCTGTATAATGCAAGATGGCCATATCAATTTAGGAAAATTGATGAACTCGTAGATGAGCTGGATGTCAAAGATGTTCAAGAATCAGGAAACCATGAGACAGTGGCAGCTGCATCAGATGGTGTTGGTGGGATGGGAGTTGCTGCAGCAGGTTCAGGCAATCCAAATGTTGGATTCTAATTGAAATTAACCTCCCATAATAAAACAAGAAAAATAAATTATGAATTATAGGTGTACATTTGTAGGACTGCAAATGTGGTCCAGACAAAGACATAGATTCCATCTTTTTATAGCATTTACGTGAATAATGAAATTCATTCAACCTTTCATCATCCTAGCTCTTACTGCTTATGTCAGTATAAAAACGTTATTTTAAATTATC

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00823	105243	112577	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K01950	E6.3.5.1, NADSYN1, QNS1, nadE	EC:6.3.5.1	Nicotinate and nicotinamide metabolism	map00760

Gene Ontology

biological_process

GO:0006807 nitrogen compound metabolic process

GO:0009435 NAD biosynthetic process

molecular_function

GO:0003952 NAD+ synthase (glutamine-hydrolyzing) activity

GO:0005524 ATP binding

GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000823s00027915.1	PF00795.17	CN_hydrolase	5	64	5.70E-07
Glyur000823s00027915.1	PF00795.17	CN_hydrolase	65	170	4.60E-06
Glyur000823s00027915.1	PF02540.12	NAD_synthase	309	558	2.70E-15

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	2.707
SRR1783600	control	2.640
SRR1783602	moderate drought stress	3.329
SRR1811619	moderate drought stress	3.184

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	6.325
DRR006520	Root Summer glycyrrhizin high producing strain	6.073
DRR006521	Root Winter glycyrrhizin high producing strain	2.436
DRR006522	Root Winter glycyrrhizin high producing strain	2.402
DRR006523	Root Summer glycyrrhizin low producing strain	3.913
DRR006524	Root Summer glycyrrhizin low producing strain	3.914
DRR006525	Leaf Summer glycyrrhizin high producing strain	11.762
DRR006526	Leaf Summer glycyrrhizin high producing strain	11.690

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	21.792
SRR2868004	Drought Stress (root)	23.546
SRR2967015	Control (root)	20.138

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	19.437
SRR9715740	Leaf	19.688
SRR9715741	Leaf	25.438
SRR9715739	Root	2.568
SRR9715742	Root	7.173
SRR9715743	Root	6.961

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	4.007
SRR8749028	MeJA induced 9h	6.699
SRR8749029	MeJA induced 9h	5.698
SRR8749030	Uninduced	5.121
SRR8749031	Uninduced	4.794
SRR8749032	Uninduced	2.495

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	18.446
SRR8400027	Control - Root	20.916