Gene detail

Gene detail information of Glyur000823s00027914

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G42020.1	2.00E-107	Heat shock protein 70 (Hsp 70) family protein
NR	EAY91599.1	0	hypothetical protein OsI_13234 [Oryza sativa Indica Group]
COG	YP_004604523.1	5.00E-68	chaperone protein dnaK [Flexistipes sinusarabici DSM 4947]
Swissprot	tr\|Q03686\|BIP8_TOBAC	6.00E-159	Luminal-binding protein 8 (Fragment)
trEMBL	tr\|A2XL89\|A2XL89_ORYSI	0	Putative uncharacterized protein {ECO:0000313\|EMBL:EAY91599.1}

Sequence

Transcript Sequence

>Glyur000823s00027914.1
AACTCCATTTGCTGCAAAACTCGTCATTCATCGTGGAAGCAACAGCGTAACAGTACACCATGGCTGGCTCGTGTTCACGCGGGTCTCTGGTTATTCTCGCCATCGTTTCCTTCGGATGTCTATTTGCAATTTCTATTGCCAAAGAGGAAGCCACCAAGTTGGGGACAGTCATTGGGATAGACCTTGGAACAACCTATTCGTGTGTTGGTGTTTACAAGAATGGTCATGTTGAAATCATAGCCAACGACCAAGGTAACCGTATCACTCCATCATGGGTTGCTTTCACNGACAGTGAGAGACTGATCGGGGAGGCTGCAAAGAATCTGGCAGCTGTCAACCCAGAAAGGACCATCTTTGATGTCAAGAGACTCATCGGACGAAAGTTTGAAGATAAGGAAGTCCAAAGAGATATGAAGCTTGTTCCTTATAAGATTGTCAACAAGGATGGAAAACCTTACATACAAGTAAAAATCAAGGATGGTGAGACCAAGGTGTTCAGCCCTGAGGAAATCAGTGCCATGATTCTGACGAAGATGAAGGAAACTGCNGAAGCATTCCTCGGCAAGAAAATTAATGATGCTGTGGTCACTGTCCCGGATATCCTTCTCCTGGATGTGGCTCCCCTCACTCTTGGAATTGAAACTGTTGGTGGGGTGATGACAAAGTTGATTCCCAGAAATACTGTTATCCCGACCAAGAAATCTCAGGTTTTCACAACCTACCAGGATCAGCAGACTACCGTTTCCATTCAGGTATTTGAAGGTGAGAGGAGTCTCACAAAGGATTGCCGGCTTCTTGGGAAGTTTGATCTGTCTGGAATTCCACCAGCTCCAAGAGGTACCCCTCAAATTGAAGTGACCTTTGAAGTTGATGCAAATGGCATCCTAAATGTCAAGGCAGAAGACAAGGGCACTGGTAAATCAGAAAAGATCACCATTACAAATGAGAAGGGACGCCTGAGCCAGGAGGAAATTGAGCGAATGGTTCGGGAAGCNGAAGAGTTTGCCGAGGAAGACAAAAAAGTCAAGGAGAGAATCGATGCTCGCAATACCCTGGAAACCTACGTCTACAACATGAAAAACCAGGTCAGTGACAAGGACAAGCTGGCCGACAAGTTGGAGTCAGATGAGAAGGAGAAAATTGAAACCGCAGTGAAGGAAGCACTTGAATGGCTGGATGACAACCAGAGTGTGGAGAAAGAAGAATACGAGGAGAAACTCAAAGAGGTCGAAGCCGTTTGTAACCCAATTATCACTGCTGTCTATCAGAGGTCTGGNGGAGCTCCAGATGGTGCATCAGGGGAGGACGAGGATGACTCTCGTGACGAGCTATAGAGAGATGTTTCCTCAAATTTGGCTCGTGCTTCTAAAGCAGGAGCAAGAAATGATGAGAAGGAGTAGGTTAAGCGGAGTCTTAGTTGGTTAAAATTTAAGTTTTTATGATAATGGGGGAGTTGAGAAGAATTACCCCCACACTTGTAATTTTTGGCTGCGAGGATACTTCATAGATAAATCAGTTGTATTTCCCCCGTTTTTT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00823	99172	102877	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

Not hits found.

Not hits found.

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000823s00027914.1	PF00012.15	HSP70	179	403	1.10E-76

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	52.647
SRR1783600	control	53.540
SRR1783602	moderate drought stress	46.913
SRR1811619	moderate drought stress	47.050

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	121.818
DRR006520	Root Summer glycyrrhizin high producing strain	120.278
DRR006521	Root Winter glycyrrhizin high producing strain	76.704
DRR006522	Root Winter glycyrrhizin high producing strain	74.746
DRR006523	Root Summer glycyrrhizin low producing strain	63.399
DRR006524	Root Summer glycyrrhizin low producing strain	63.535
DRR006525	Leaf Summer glycyrrhizin high producing strain	33.351
DRR006526	Leaf Summer glycyrrhizin high producing strain	33.484

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	316.113
SRR2868004	Drought Stress (root)	162.555
SRR2967015	Control (root)	170.575

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	115.228
SRR9715740	Leaf	49.050
SRR9715741	Leaf	102.491
SRR9715739	Root	29.355
SRR9715742	Root	90.545
SRR9715743	Root	81.432

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	191.594
SRR8749028	MeJA induced 9h	100.278
SRR8749029	MeJA induced 9h	125.332
SRR8749030	Uninduced	97.375
SRR8749031	Uninduced	79.345
SRR8749032	Uninduced	102.863

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	158.311
SRR8400027	Control - Root	151.396