Gene detail information of Glyur000823s00027908 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | KHN11904.1 | 2.71E-53 | hypothetical protein glysoja_019877 [Glycine soja] |
| trEMBL | tr|K7M4H8|K7M4H8_SOYBN | 1.00E-53 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA14G02495.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00823 | 62048 | 62683 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000823s00027908.1 | PF05553.6 | DUF761 | 179 | 203 | 1.00E-07 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 12.077 |
| SRR1783600 | control | 11.891 |
| SRR1783602 | moderate drought stress | 66.572 |
| SRR1811619 | moderate drought stress | 65.941 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 213.131 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 214.325 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 140.824 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 132.056 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 682.914 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 684.211 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 12.941 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 13.134 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 6.725 |
| SRR2868004 | Drought Stress (root) | 11.301 |
| SRR2967015 | Control (root) | 38.796 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 113.940 |
| SRR9715740 | Leaf | 143.154 |
| SRR9715741 | Leaf | 72.866 |
| SRR9715739 | Root | 198.201 |
| SRR9715742 | Root | 222.411 |
| SRR9715743 | Root | 208.629 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 180.275 |
| SRR8749028 | MeJA induced 9h | 235.819 |
| SRR8749029 | MeJA induced 9h | 256.151 |
| SRR8749030 | Uninduced | 578.811 |
| SRR8749031 | Uninduced | 272.539 |
| SRR8749032 | Uninduced | 183.222 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 19.860 |
| SRR8400027 | Control - Root | 48.532 |