Gene detail information of Glyur000822s00038922 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_009611242.1 | 2.17E-48 | PREDICTED: uncharacterized protein LOC104104787 [Nicotiana tomentosiformis] |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00822 | 48760 | 50881 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.059 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.882 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.814 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.363 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.517 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.162 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.078 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 664.140 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 727.422 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.571 |
| SRR2868004 | Drought Stress (root) | 3.189 |
| SRR2967015 | Control (root) | 0.131 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1468.739 |
| SRR9715740 | Leaf | 1382.366 |
| SRR9715741 | Leaf | 1111.575 |
| SRR9715739 | Root | 0.321 |
| SRR9715742 | Root | 0.931 |
| SRR9715743 | Root | 0.815 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.054 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.062 |
| SRR8400027 | Control - Root | 0.232 |