Gene detail information of Glyur000821s00020788.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G68150.1 | 5.00E-42 | WRKY DNA-binding protein 9 |
| NR | XP_007159029.1 | 0 | hypothetical protein PHAVU_002G202500g [Phaseolus vulgaris] |
| Swissprot | tr|Q9C9F0|WRKY9_ARATH | 2.00E-72 | Probable WRKY transcription factor 9 |
| trEMBL | tr|V7CNT4|V7CNT4_PHAVU | 0 | Uncharacterized protein {ECO:0000313|EMBL:ESW31023.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00821 | 62491 | 65286 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | WRKY |
| EAR motif-containing Proteins | WRKY |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000821s00020788.1 | PF03106.10 | WRKY | 259 | 318 | 1.20E-27 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.371 |
| SRR1783600 | control | 1.415 |
| SRR1783602 | moderate drought stress | 2.318 |
| SRR1811619 | moderate drought stress | 2.440 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.396 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.509 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 20.293 |
| SRR2868004 | Drought Stress (root) | 29.799 |
| SRR2967015 | Control (root) | 21.303 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.124 |
| SRR9715740 | Leaf | 1.109 |
| SRR9715741 | Leaf | 1.020 |
| SRR9715739 | Root | 0.051 |
| SRR9715742 | Root | 0.667 |
| SRR9715743 | Root | 0.310 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 39.565 |
| SRR8749028 | MeJA induced 9h | 94.533 |
| SRR8749029 | MeJA induced 9h | 58.470 |
| SRR8749030 | Uninduced | 112.916 |
| SRR8749031 | Uninduced | 263.855 |
| SRR8749032 | Uninduced | 83.303 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 10.265 |
| SRR8400027 | Control - Root | 7.546 |