Gene detail

Gene detail information of Glyur000821s00020782.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G03970.1	5.00E-18	G-box binding factor 4
NR	XP_007159037.1	8.45E-79	hypothetical protein PHAVU_002G203300g [Phaseolus vulgaris]
Swissprot	tr\|P42777\|GBF4_ARATH	1.00E-36	G-box-binding factor 4
trEMBL	tr\|V7CQ14\|V7CQ14_PHAVU	3.00E-79	Uncharacterized protein {ECO:0000313\|EMBL:ESW31031.1}

Sequence

Transcript Sequence

>Glyur000821s00020782.1
CGAGTATTCTTCAATTATCATACAACTTATTTCAATTTAAGCCTCGCCTAATCTCTAATCAGCAATGTTGATTGATAATAAAACAATCATCACATGCTTTTAGTTTCAGAATCTAGCTAAGCTAGCTAACTCCCCACTGAACCGACACTTCAGAAATAAATTATAAAAAGAAGTTACCCCCCATTAATAAAATTCATTATTCTGCCGAGTCTTGATTTGTTCATTAAATTAAAACACACTTTATTAGGATAGGAAGGTGTAAACACAATAAAAGAATGAATTAATTAAAGAAAAAGACGTTTCAGAGAATGGGAGAGCAATCGAGTCATGTGATGATGTGGTGTATGAAAGACGGAGGAAGAAAGAAAGAAAGAAAGAAAGGGGAGGGGGTATGAATGAAAGAATGAAAAAGGCATATATATATATATATAAATGCATGTCCATCTTCTGATCCTCAAATCCCAAACTGAAAGCAAAGGCCAAACCTGTTGTGCAATGTGTAATAATTATTATTATAAAGCTGTGAAGAAAAAGAATTGAGGCATGGTTGGTTTGGTTGAGTCCAACTCCAAACCCACATCAGAGCTTGGTGAGAGTTGAAATTGAACCCCGAATCAAAACAAACAACGAAAAAGGAACAAAAGGGACGGCTAGAAACGCGGCATGGCGTCGTCGAAGGTTGTCTCGACGAATCCGGATCTGCCACGCGACTCTCCTATATCTTCTTCTTCTTCTTCCCTCTCTACCCTTCTCCTCTCCGATCTTCCCCCTAACACCATGGACGACCTCCTCAAGTCCATCTACAACACTCACCCTCACCCTCTTCCTCTTCCTAAGGACACCAAGCTCGACGATGTTTGGAAAGACATCGTCACCGGCACCCACCGTCCCTCTTCCGACGATCCTTCCTCCGCCGCCGCCGTAGAGGAAATGACCCTCGAGGATTTCTTGACCAAAGCTGGTGCCGTTACGGAGGATGATGTTAGAGGGGTTCTTCCTCACTTCCCTCTCCCTCCTCCTCCCTCNTCTACCGACGCTTCTTCCTCTCTCCAAGTCCAACAACCCCAACAGCCACAACAACNCTCCGTAGCTAAAGGGAAGAGAAGGGNTGTTGAGGAACCCCTTGATAAGGCCACTCTTCAGAANCAGCGAAGAATGATCAAGAATAGAGAATCCGCCGCCAGGTCTAGGGAACGCAAACAGGCTTACACTACTGAGCTTGAGTATCTGGTTCAGCAGCTGGAGGAAGAGAATGCGCGATTATTGGAAGAAGAGGCTGAGAAGAAGAAGCAGAGGTACAAGCAGCTAAAAGAGTGTCTCATTCCAATTGTGGAGAAGCCTAAACCAAAACGGAGACTTCGAAGATCGAATTCAGCCCAAACATTGTGATCTGTTTGCCATCAGCCAGACAGACTAGGATTTTTGGCTTGGTGTAGATATAAGGGGGAAAGAGTTTCAGAGGTTACATACCATTGCTGGTTCTGGGAGTTAGTTACATTGTATAGANAAAAAATAGCAGCAGTCAAATAATTCAAGTTATTTGATCAACCTGATACGTATACTATTGACCATTGCTTGTGGAATATACATGGTTCTGGGTGGATTGATAGGCCTTTTGGAATAGTTTGAAATAAGGATGTATGTGCTAGGTTAGTTTATGCAATTTGGATGCTAATGGTTGTTGATTTNGTGAATGGGGTACGGCAAGTAAAGGAATGAATAATGAATGACCTGTTAGATTTCATATGAACTGGTAGATTAGGAAGA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00821	26714	30530	-

Gene family

Gene family	subfamily
Transcription Factors Family	bZIP

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006355 regulation of transcription, DNA-templated

molecular_function

GO:0003700 transcription factor activity, sequence-specific DNA binding

GO:0043565 sequence-specific DNA binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000821s00020782.1	PF00170.16	bZIP_1	157	216	1.90E-12

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	31.931
SRR1783600	control	31.663
SRR1783602	moderate drought stress	26.465
SRR1811619	moderate drought stress	26.382

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	24.897
DRR006520	Root Summer glycyrrhizin high producing strain	24.878
DRR006521	Root Winter glycyrrhizin high producing strain	25.136
DRR006522	Root Winter glycyrrhizin high producing strain	24.191
DRR006523	Root Summer glycyrrhizin low producing strain	31.569
DRR006524	Root Summer glycyrrhizin low producing strain	31.395
DRR006525	Leaf Summer glycyrrhizin high producing strain	8.440
DRR006526	Leaf Summer glycyrrhizin high producing strain	8.081

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	19.814
SRR2868004	Drought Stress (root)	22.732
SRR2967015	Control (root)	19.307

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	19.978
SRR9715740	Leaf	20.945
SRR9715741	Leaf	18.911
SRR9715739	Root	11.113
SRR9715742	Root	20.260
SRR9715743	Root	18.673

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	35.974
SRR8749028	MeJA induced 9h	21.347
SRR8749029	MeJA induced 9h	30.036
SRR8749030	Uninduced	33.266
SRR8749031	Uninduced	35.472
SRR8749032	Uninduced	34.692

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	37.011
SRR8400027	Control - Root	31.200