Gene detail information of Glyur000820s00032902 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G00750.1 | 0 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
| NR | XP_004515722.1 | 0 | PREDICTED: probable methyltransferase PMT16-like [Cicer arietinum] |
| Swissprot | tr|Q9ZPH9|PMTF_ARATH | 0 | Probable methyltransferase PMT15 |
| trEMBL | tr|K7LDX5|K7LDX5_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA09G26650.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00820 | 92277 | 100353 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000820s00032902.1 | PF03141.11 | Methyltransf_29 | 1 | 479 | 4.90E-204 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 15.702 |
| SRR1783600 | control | 15.014 |
| SRR1783602 | moderate drought stress | 10.479 |
| SRR1811619 | moderate drought stress | 10.025 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 14.944 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 15.498 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.038 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 11.639 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 11.608 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 28.671 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 29.376 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 32.768 |
| SRR2868004 | Drought Stress (root) | 20.462 |
| SRR2967015 | Control (root) | 28.090 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 36.934 |
| SRR9715740 | Leaf | 40.857 |
| SRR9715741 | Leaf | 38.271 |
| SRR9715739 | Root | 15.813 |
| SRR9715742 | Root | 20.463 |
| SRR9715743 | Root | 20.835 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 24.580 |
| SRR8749028 | MeJA induced 9h | 6.050 |
| SRR8749029 | MeJA induced 9h | 7.912 |
| SRR8749030 | Uninduced | 0.425 |
| SRR8749031 | Uninduced | 0.341 |
| SRR8749032 | Uninduced | 0.878 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 39.308 |
| SRR8400027 | Control - Root | 55.030 |