Gene detail information of Glyur000819s00036708 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G43370.1 | 5.00E-04 | RNA-binding (RRM/RBD/RNP motifs) family protein |
| NR | XP_004492943.1 | 2.42E-13 | PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein-like [Cicer arietinum] |
| trEMBL | tr|K7LAY4|K7LAY4_SOYBN | 1.00E-13 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G48140.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00819 | 49551 | 51681 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.055 |
| SRR1783600 | control | 4.807 |
| SRR1783602 | moderate drought stress | 5.156 |
| SRR1811619 | moderate drought stress | 6.086 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 11.955 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 12.831 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 16.165 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 17.349 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.617 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.595 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 4.192 |
| SRR2868004 | Drought Stress (root) | 8.076 |
| SRR2967015 | Control (root) | 3.890 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.397 |
| SRR9715740 | Leaf | 3.624 |
| SRR9715741 | Leaf | 2.124 |
| SRR9715739 | Root | 3.719 |
| SRR9715742 | Root | 8.691 |
| SRR9715743 | Root | 7.262 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.353 |
| SRR8749028 | MeJA induced 9h | 0.472 |
| SRR8749029 | MeJA induced 9h | 0.188 |
| SRR8749030 | Uninduced | 0.157 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.123 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.753 |
| SRR8400027 | Control - Root | 5.061 |