Gene detail information of Glyur000815s00035010 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G50011.1 | 7.00E-17 | conserved peptide upstream open reading frame 37 |
| NR | KHN26122.1 | 1.72E-31 | hypothetical protein glysoja_019446 [Glycine soja] |
| trEMBL | tr|V7AS08|V7AS08_PHAVU | 3.00E-28 | Uncharacterized protein {ECO:0000313|EMBL:ESW08349.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00815 | 8963 | 13407 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 91.445 |
| SRR1783600 | control | 91.872 |
| SRR1783602 | moderate drought stress | 68.295 |
| SRR1811619 | moderate drought stress | 68.391 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 110.119 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 109.528 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 45.904 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 45.364 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 190.300 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 190.598 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 33.400 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 33.385 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 112.191 |
| SRR2868004 | Drought Stress (root) | 113.223 |
| SRR2967015 | Control (root) | 124.128 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 66.729 |
| SRR9715740 | Leaf | 92.060 |
| SRR9715741 | Leaf | 80.557 |
| SRR9715739 | Root | 70.691 |
| SRR9715742 | Root | 158.552 |
| SRR9715743 | Root | 146.347 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 67.894 |
| SRR8749028 | MeJA induced 9h | 49.453 |
| SRR8749029 | MeJA induced 9h | 40.243 |
| SRR8749030 | Uninduced | 39.275 |
| SRR8749031 | Uninduced | 14.041 |
| SRR8749032 | Uninduced | 17.006 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 115.766 |
| SRR8400027 | Control - Root | 146.234 |