Gene detail

Gene detail information of Glyur000814s00023379

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT4G37530.1	1.00E-71	Peroxidase superfamily protein
NR	XP_003608472.1	1.38E-122	Peroxidase [Medicago truncatula]
Swissprot	tr\|Q96510\|PER35_ARATH	8.00E-91	Peroxidase 35 (Precursor)
trEMBL	tr\|O24080\|O24080_MEDSA	1.00E-121	Peroxidase2 {ECO:0000313\|EMBL:CAA62228.1} (Precursor)

Sequence

Transcript Sequence

>Glyur000814s00023379.1
CCCCCTCATACTTTTCCACTCAAGCACCATCACTCACACCCTTTGCAACCATAAATCCTCTGCATTTTCTTCTTCTTCCTCCTTTTCTCTCCCTCTGCAAAAGCAAAAGCAAAAGCAGCAAATGGGTCGGCTTAACCTTATACTTGTGTGGTCACTCACATTAACGCTGTGTCTCTGTCTTTATCCTACTTTTGCACAGCTTAGCCCAAACCACTATGCTAAAACCTGCCCCAATCTNGAAAGCATCGTTAGAGGAGTAGTTCAAAGGAAATTCCAACAAACATTTGTTACAGTTCCTGCCACCCTTCGCCTCTTCTTTCACGATTGTTTTGTCCAGGGTTGTGATGCTTCAGTTTTGGTGCAATCCACCGGAAACAACAAAGCAGAGAAGGATCACCCTGAGAATCTGTCATTAGCGGGTGATGGGTTTGACACAGTGATAAAAGCAAAAGCAGCAGTAGATGCTAATCCACAGTGCAGGAACAAAGTCTCGTGTGCTGATATTCTCGCCTTGGCAACCCGGGATGTTGTTGTGCTGGCTGGTGGACCGTCCTACACGGTTGAATTGGGAAGATTTGATGGGCTAGTCTCAAGAGCTTCAGATGTACATGGGAGGCTCCCTCAGCCAACCTTCAATTTGAACCAGCTGAATTCCATGTTTGCAGCACATGGACTCACCCAAACAGACATGATTGCCCTCTCAGGTAATGAGAGTCTCACGATTTGAAATGGGGTCNCATGGGCATAGATGTTCTTAGGTGCTTACGTATCAGGATTAATTCAAGCAACAATGATACATGTACACCCACTTTTTTTTAACACCCATCCAACACCTATTTTTGTTTCTATCTCTCTCTTCCTATCACATCATTTATCTATCACATCTATCACTTATCTCTCTTTTATTTCTTTCTCTCTCTGGGTGTTAAATGGGTATTGGGTGTCTATGAATCATTTTTCTTAATTCAAGATCAGAGTCTTACTCTAGGTGGTTGAATATTTATCACCTCATTTATGATATTAAAGACATAATTAAATTAAAATAGGAGAAGATGATGAATCACATGACTGAAATTGTACATA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00814	113716	115428	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K00430	E1.11.1.7	EC:1.11.1.7	Phenylpropanoid biosynthesis	map00940

Gene Ontology

biological_process

GO:0006979 response to oxidative stress

GO:0055114 oxidation-reduction process

molecular_function

GO:0004601 peroxidase activity

GO:0020037 heme binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000814s00023379.1	PF00141.18	peroxidase	44	197	2.00E-42

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	573.726
SRR1783600	control	566.447
SRR1783602	moderate drought stress	1516.323
SRR1811619	moderate drought stress	1520.451

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	161.810
DRR006520	Root Summer glycyrrhizin high producing strain	159.728
DRR006521	Root Winter glycyrrhizin high producing strain	214.257
DRR006522	Root Winter glycyrrhizin high producing strain	209.447
DRR006523	Root Summer glycyrrhizin low producing strain	176.700
DRR006524	Root Summer glycyrrhizin low producing strain	174.126
DRR006525	Leaf Summer glycyrrhizin high producing strain	146.357
DRR006526	Leaf Summer glycyrrhizin high producing strain	147.155

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	210.462
SRR2868004	Drought Stress (root)	252.896
SRR2967015	Control (root)	175.329

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	125.847
SRR9715740	Leaf	30.293
SRR9715741	Leaf	100.742
SRR9715739	Root	207.669
SRR9715742	Root	256.791
SRR9715743	Root	249.484

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	159.583
SRR8749028	MeJA induced 9h	142.766
SRR8749029	MeJA induced 9h	142.321
SRR8749030	Uninduced	590.320
SRR8749031	Uninduced	331.645
SRR8749032	Uninduced	271.610

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	248.623
SRR8400027	Control - Root	292.838