Gene detail information of Glyur000814s00023371 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_006829609.1 | 5.26E-15 | hypothetical protein AMTR_s00122p00023550 [Amborella trichopoda] |
| trEMBL | tr|W1NPP6|W1NPP6_AMBTC | 2.00E-15 | Uncharacterized protein {ECO:0000313|EMBL:ERM97025.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00814 | 70817 | 71311 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 147.932 |
| SRR1783600 | control | 152.315 |
| SRR1783602 | moderate drought stress | 142.492 |
| SRR1811619 | moderate drought stress | 125.797 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 136.502 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 132.811 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 27.477 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 24.168 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 157.863 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 167.617 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 46.832 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 43.805 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 11.752 |
| SRR2868004 | Drought Stress (root) | 9.090 |
| SRR2967015 | Control (root) | 9.958 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 5.003 |
| SRR9715740 | Leaf | 1.435 |
| SRR9715741 | Leaf | 1.514 |
| SRR9715739 | Root | 37.871 |
| SRR9715742 | Root | 17.417 |
| SRR9715743 | Root | 23.659 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 6.354 |
| SRR8749028 | MeJA induced 9h | 5.419 |
| SRR8749029 | MeJA induced 9h | 2.977 |
| SRR8749030 | Uninduced | 0.655 |
| SRR8749031 | Uninduced | 0.001 |
| SRR8749032 | Uninduced | 1.978 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 17.123 |
| SRR8400027 | Control - Root | 19.986 |