Gene detail information of Glyur000814s00023365 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G33690.1 | 1.00E-13 | Late embryogenesis abundant protein, group 6 |
| NR | XP_004509086.1 | 7.68E-41 | PREDICTED: uncharacterized protein LOC101513321 [Cicer arietinum] |
| trEMBL | tr|G7LGF6|G7LGF6_MEDTR | 1.00E-36 | Late embryogenesis abundant protein, group 6 {ECO:0000313|EMBL:AET04080.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00814 | 66194 | 66454 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000814s00023365.1 | PF10714.4 | LEA_6 | 16 | 86 | 1.50E-33 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.827 |
| SRR1783600 | control | 0.812 |
| SRR1783602 | moderate drought stress | 3.993 |
| SRR1811619 | moderate drought stress | 4.751 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 41.514 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 40.648 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 14.864 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 14.399 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 102.846 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 112.346 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.464 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.776 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 6.587 |
| SRR2868004 | Drought Stress (root) | 16.745 |
| SRR2967015 | Control (root) | 11.623 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 9.258 |
| SRR9715740 | Leaf | 12.403 |
| SRR9715741 | Leaf | 2.959 |
| SRR9715739 | Root | 43.937 |
| SRR9715742 | Root | 11.293 |
| SRR9715743 | Root | 17.253 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 13.011 |
| SRR8749028 | MeJA induced 9h | 28.720 |
| SRR8749029 | MeJA induced 9h | 41.232 |
| SRR8749030 | Uninduced | 1.174 |
| SRR8749031 | Uninduced | 0.766 |
| SRR8749032 | Uninduced | 4.893 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 23.193 |
| SRR8400027 | Control - Root | 42.384 |