Gene detail information of Glyur000814s00023356 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | AES90652.2 | 1.14E-48 | hypothetical protein MTR_4g095280 [Medicago truncatula] |
| Swissprot | tr|Q9FPR2|AGP18_ARATH | 5.00E-15 | Lysine-rich arabinogalactan protein 18 (Precursor) |
| trEMBL | tr|G7JCS7|G7JCS7_MEDTR | 4.00E-49 | Uncharacterized protein {ECO:0000313|EMBL:AES90652.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00814 | 23461 | 25726 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 323.955 |
| SRR1783600 | control | 325.556 |
| SRR1783602 | moderate drought stress | 119.700 |
| SRR1811619 | moderate drought stress | 119.177 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 251.921 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 250.011 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.404 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.369 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 65.795 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 66.916 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 83.746 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 84.149 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 391.887 |
| SRR2868004 | Drought Stress (root) | 161.703 |
| SRR2967015 | Control (root) | 161.730 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 78.439 |
| SRR9715740 | Leaf | 10.224 |
| SRR9715741 | Leaf | 14.261 |
| SRR9715739 | Root | 257.213 |
| SRR9715742 | Root | 123.224 |
| SRR9715743 | Root | 134.090 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 120.403 |
| SRR8749028 | MeJA induced 9h | 41.791 |
| SRR8749029 | MeJA induced 9h | 73.566 |
| SRR8749030 | Uninduced | 13.655 |
| SRR8749031 | Uninduced | 1.025 |
| SRR8749032 | Uninduced | 7.220 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 157.042 |
| SRR8400027 | Control - Root | 175.444 |