Gene detail

Gene detail information of Glyur000813s00029793.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT2G43760.3	6.00E-71	molybdopterin biosynthesis MoaE family protein
NR	XP_004513960.1	5.92E-119	PREDICTED: molybdopterin synthase catalytic subunit-like isoform X1 [Cicer arietinum]
COG	YP_002522907.1	6.00E-36	molybdenum cofactor biosynthesis protein D/E [Thermomicrobium roseum DSM 5159]
Swissprot	tr\|O22827\|MOC2B_ARATH	2.00E-94	Molybdopterin synthase catalytic subunit {ECO:0000255\|HAMAP-Rule:MF_03052}
trEMBL	tr\|G7IZR4\|G7IZR4_MEDTR	3.00E-117	Molybdopterin synthase catalytic subunit {ECO:0000256\|HAMAP-Rule:MF_03052}

Sequence

Transcript Sequence

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00813	51077	51655	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K03635	MOCS2B, moaE	EC:2.8.1.12	Folate biosynthesis	map00790
			Sulfur relay system	map04122

Gene Ontology

biological_process
GO:0006777 Mo-molybdopterin cofactor biosynthetic process

cellular_component

GO:0005829 cytosol

GO:0019008 molybdopterin synthase complex

molecular_function
GO:0030366 molybdopterin synthase activity

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Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000813s00029793.1	PF02391.12	MoaE	15	127	1.10E-38

Expression pattern

SRA Experiment	Description	TPM
SRR1783599	control	20.899
SRR1783600	control	22.428
SRR1783602	moderate drought stress	25.930
SRR1811619	moderate drought stress	24.914

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	37.102
DRR006520	Root Summer glycyrrhizin high producing strain	38.354
DRR006521	Root Winter glycyrrhizin high producing strain	38.219
DRR006522	Root Winter glycyrrhizin high producing strain	36.285
DRR006523	Root Summer glycyrrhizin low producing strain	38.385
DRR006524	Root Summer glycyrrhizin low producing strain	38.173
DRR006525	Leaf Summer glycyrrhizin high producing strain	6.188
DRR006526	Leaf Summer glycyrrhizin high producing strain	7.385

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	29.109
SRR2868004	Drought Stress (root)	37.656
SRR2967015	Control (root)	37.131

SRA Experiment	Description	TPM
SRR9715738	Leaf	18.819
SRR9715740	Leaf	25.534
SRR9715741	Leaf	23.609
SRR9715739	Root	35.691
SRR9715742	Root	21.131
SRR9715743	Root	28.303

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	31.881
SRR8749028	MeJA induced 9h	30.435
SRR8749029	MeJA induced 9h	30.437
SRR8749030	Uninduced	27.201
SRR8749031	Uninduced	23.584
SRR8749032	Uninduced	40.181

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	28.498
SRR8400027	Control - Root	23.997