Gene detail information of Glyur000809s00030657 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G30390.2 | 3.00E-163 | Transmembrane amino acid transporter family protein |
| NR | XP_007139375.1 | 0 | hypothetical protein PHAVU_008G024100g [Phaseolus vulgaris] |
| Swissprot | tr|Q9C9J0|LHTL5_ARATH | 8.00E-06 | Lysine histidine transporter-like 5 |
| trEMBL | tr|V7B0N0|V7B0N0_PHAVU | 0 | Uncharacterized protein {ECO:0000313|EMBL:ESW11369.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00809 | 12627 | 16007 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000809s00030657.1 | PF01490.13 | Aa_trans | 45 | 448 | 9.10E-55 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 88.177 |
| SRR1783600 | control | 89.036 |
| SRR1783602 | moderate drought stress | 66.031 |
| SRR1811619 | moderate drought stress | 65.349 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 66.028 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 65.676 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 105.363 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 103.160 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 109.498 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 109.820 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 56.340 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 56.508 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 330.054 |
| SRR2868004 | Drought Stress (root) | 393.126 |
| SRR2967015 | Control (root) | 307.861 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 53.377 |
| SRR9715740 | Leaf | 61.034 |
| SRR9715741 | Leaf | 58.641 |
| SRR9715739 | Root | 127.165 |
| SRR9715742 | Root | 165.477 |
| SRR9715743 | Root | 151.590 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 25.454 |
| SRR8749028 | MeJA induced 9h | 59.886 |
| SRR8749029 | MeJA induced 9h | 44.631 |
| SRR8749030 | Uninduced | 107.734 |
| SRR8749031 | Uninduced | 218.110 |
| SRR8749032 | Uninduced | 110.772 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 183.612 |
| SRR8400027 | Control - Root | 131.143 |