Gene detail information of Glyur000806s00031685 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G52820.1 | 1.00E-120 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein |
| NR | XP_003528366.1 | 0 | PREDICTED: probable 2-oxoglutarate-dependent dioxygenase AOP1.2-like [Glycine max] |
| COG | YP_008518749.1 | 7.00E-19 | 2OG-Fe(II) oxygenase superfamily protein [Variovorax paradoxus B4] |
| Swissprot | tr|Q945B6|AOP1L_ARATH | 2.00E-107 | Probable 2-oxoglutarate-dependent dioxygenase AOP1.2 |
| trEMBL | tr|K7KZF3|K7KZF3_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA07G03801.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00806 | 79976 | 81773 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000806s00031685.1 | PF14226.1 | DIOX_N | 9 | 88 | 2.20E-09 |
| Glyur000806s00031685.1 | PF03171.15 | 2OG-FeII_Oxy | 159 | 251 | 8.40E-16 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.422 |
| SRR1783600 | control | 1.342 |
| SRR1783602 | moderate drought stress | 0.294 |
| SRR1811619 | moderate drought stress | 0.313 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 103.476 |
| SRR2868004 | Drought Stress (root) | 117.934 |
| SRR2967015 | Control (root) | 65.764 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 8.453 |
| SRR8400027 | Control - Root | 8.760 |