Gene detail information of Glyur000806s00031684.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G15550.1 | 8.00E-101 | gibberellin 3-oxidase 1 |
| NR | XP_003529820.1 | 2.19E-176 | PREDICTED: gibberellin 3-beta-dioxygenase 1-like [Glycine max] |
| COG | YP_553500.1 | 4.00E-22 | putative oxidoreductase [Burkholderia xenovorans LB400] |
| Swissprot | tr|O24648|G3OX_PEA | 1.00E-164 | Gibberellin 3-beta-dioxygenase 1 |
| trEMBL | tr|I1KH57|I1KH57_SOYBN | 8.00E-177 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA07G03810.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00806 | 73236 | 75640 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K04124 | E1.14.11.15 | EC:1.14.11.15 | Diterpenoid biosynthesis | map00904 |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000806s00031684.1 | PF14226.1 | DIOX_N | 58 | 148 | 6.30E-22 |
| Glyur000806s00031684.1 | PF03171.15 | 2OG-FeII_Oxy | 196 | 291 | 5.70E-23 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.893 |
| SRR2868004 | Drought Stress (root) | 2.867 |
| SRR2967015 | Control (root) | 3.344 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.098 |
| SRR9715741 | Leaf | 0.073 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.388 |
| SRR9715743 | Root | 0.228 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.597 |
| SRR8400027 | Control - Root | 1.017 |