Gene detail

Gene detail information of Glyur000806s00031680

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G80360.1	8.00E-150	Pyridoxal phosphate (PLP)-dependent transferases superfamily protein
NR	XP_004506873.1	0	PREDICTED: bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase-like isoform X2 [Cicer arietinum]
COG	YP_001658061.1	4.00E-54	aspartate aminotransferase [Microcystis aeruginosa NIES-843]
Swissprot	tr\|E9L7A5\|PAT_PETHY	2.00E-26	Bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase (Precursor)
trEMBL	tr\|A0A072UG88\|A0A072UG88_MEDTR	0	Aspartate aminotransferase {ECO:0000313\|EMBL:KEH28759.1}

Sequence

Transcript Sequence

>Glyur000806s00031680.1
GTGGAAGCGAGTCCGGGAAATTGGAAAACGAACAAAACAAGACAAGACAGACAAGCAAAACGAATCGTTTTCATGGGTAGTGGTCCTATGCTGATTTGTCATGACTCATCAGACACACTAACACCGAGACACAGACACAGACANAGACAAAATTCACATCACAAACCCACTTTCTGAGGCTCTGATTTCAGTGAAAAACATAACACTTCTACATCAATATCATCCAATCCCTTCTTCTCTTCTTACCCATAATTTCATAAATTATAAATACCACAGATTTTGTGCATTTCCAGTAAAGGACAGATTATTCAGTTCACACTACTACAATTCTAATCGAAAAATTGAAAGTACCCATGATACAGTAGCTTGTAAATGTAGAAACTTTAATACCCCCGGATTATTCTCTGCTTGTTGGCGTTAAAGAAACGCATGCACAAGGAAAGAGAGAAGGAAAAAGCCACGGGTTTCAGTTTGGTTATTTAATTAAAAGAAAAGGAGAAGAGAGAAAAAAGAAAGAAAAAAAGCGTTTTGCCTTTTACCCTTTTTGGATTATGCTATAGTTATTAACATATATAATGGGGAGAAGGGAGAGGGTGAGGGTGGGTTGGTGAAGTGAAGCGTGGCATTTCAAAGCTAATCTCTTTTTGTTAGGTAGGTCCCTTTGTTGACGTTTATCCTCTTGGACAAGAAGACTATTTGTATAAGAGTTCATTAGATTTGGGAGGGTGTTCTCACTGTTTCACTGCAAAATCCANAACTTGAGCAACCCTTTTGGTTTTTTGGAGATGGGTTCGTACGGAAATCTCGCAAGGAGGGCTTTGGAAACCGATATGCCTGTTATGGTTCAGATGCAGGAATTGCTTCGAGGAGCTAAGAATTGCGTGTCTTTGGCCCAGGGCGTGGTACATTGGCAACCTCCGAAGCATGCGTTGGATAAGGTGAAAGAACTTGTGTGGGAGCCTTCTATTAGTCGTTATGGTAATGATGAAGGTATTCCTGAACTTAGAGTGGCATTGCTGAAAAAGTTGCGTCATGAAAATAATTTGCACAAATCCTCAGTAATGGTTACAGCAGGTGCCAATCAGGCATTCGTTAATCTAGTTCTTACTCTGTGTGATGCGGGGGATTCTGTGGTTATGTTTGCTCCTTACTACTTCAATGCATACATGTCCTTCCAGATGACCGGAATTACCAATATACTGTTGGGACCTGGTAACCCAGAAACACTTCATCCAGATGCAGACTGGTTGGAAAAGGTATTATCAGAAAGTAAACCTGTCCCAAAGCTAGTTACTGTTGTAAATCCCGGCAACCCAACCGGAACCTACATTCCAGAGTCGCTTCTAAAGAGGATTTCAGATCTCTGTATGAAAGCTGGCTCTTGGCTTGTTGTTGACAACACATATGAGGTTGGATATATAGCATATCCATCTGAAGTAGAAGGACTTGCTGCACAACTTCTCAAGGTTCAAGACAACATTCCCATCTGTGCTTCAATAATTTCCCAATACCTTGCCCTCCACTCCTTAGAAATGGGACCGGAGTGGGTTNCAGAACGAGTGAAAACTCTCGTAAAGAACAAAGAAATCGTTCTAGAGGCCCTTTCCCCGCTCGGAGAAGGTTCCGTAAAAGGAGGGGAAGGTGCTATATACCTGTGGGCAAAGCTCCCAGAAGGGCACGGTTACGACGATTTCGAAGTTGTTCGCTGGCTAGCTACNAGGCACGGGGTCGCTGTGATCCCAGGAAGTGCATCTGGTTCTTCTGGCAATCTTAGAATCTCATTTGGAGGCTTGACAGAGAATGATTGCAGAGCAGCAGCAGAAAGGCTGAAGAAAGGGTTGGAAGAATTGGTCACACATGGGTTGGTGAAGGACCAGTAAACATCTAATTCATCTCCCCCCAAAAAAGAAATTNATAGAAAAAGAAAGTCCATTTGCCAGTGGAGCAAGTTTGCAACTGGTGGCATTTGAATAAAAATGTAGGATTTACTACTTTTTCAACCTGGCTANGTTGGAGGGTAGCAAGGTTTAATAATTTTCATTTTGAATTTGATAATTCAGAATAGTAGATAAAATGCATATACTTTTTTTGTATACATTATTTAATTCCTAAATGTTTTATGCCTCATGATGGGATTGATATGTATATGTACACACACATATATATATACATGTTGTTATGGTTTTAGAGCTCAGAAAATCCCAANAGGTAGCAAAATGCAATATTAATAGAATGTAGATGAGACAAGGATGGAAGATTGGGGAAAGAATGGTGTGTGTTATTGCAGGGTGAATGAACAAGGAGAATACTCCTTCACAAGGACTGAGTTTCAAGACTTGGTTGGTTCACCTAACAATCTCTCTGAATGCCTTCCCCCTATTTAACCACCTACCTAACAGAATTGCT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00806	42321	49973	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0009058 biosynthetic process

molecular_function

GO:0003824 catalytic activity

GO:0030170 pyridoxal phosphate binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000806s00031680.1	PF00155.16	Aminotran_1_2	31	214	2.20E-24
Glyur000806s00031680.2	PF00155.16	Aminotran_1_2	31	187	9.40E-17
Glyur000806s00031680.2	PF00155.16	Aminotran_1_2	199	325	1.30E-08

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	10.577
SRR1783600	control	10.673
SRR1783602	moderate drought stress	9.518
SRR1811619	moderate drought stress	9.607

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	12.559
DRR006520	Root Summer glycyrrhizin high producing strain	12.346
DRR006521	Root Winter glycyrrhizin high producing strain	17.228
DRR006522	Root Winter glycyrrhizin high producing strain	16.648
DRR006523	Root Summer glycyrrhizin low producing strain	17.261
DRR006524	Root Summer glycyrrhizin low producing strain	17.248
DRR006525	Leaf Summer glycyrrhizin high producing strain	75.473
DRR006526	Leaf Summer glycyrrhizin high producing strain	75.794

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	43.313
SRR2868004	Drought Stress (root)	50.737
SRR2967015	Control (root)	46.662

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	141.097
SRR9715740	Leaf	186.593
SRR9715741	Leaf	167.467
SRR9715739	Root	7.418
SRR9715742	Root	17.128
SRR9715743	Root	13.675

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	34.903
SRR8749028	MeJA induced 9h	63.545
SRR8749029	MeJA induced 9h	45.135
SRR8749030	Uninduced	45.331
SRR8749031	Uninduced	47.578
SRR8749032	Uninduced	46.362

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	33.494
SRR8400027	Control - Root	30.246