Gene detail information of Glyur000805s00021378 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G50890.1 | 8.00E-150 | alpha/beta-Hydrolases superfamily protein |
| NR | XP_003530730.1 | 0 | PREDICTED: GDSL esterase/lipase At4g10955-like [Glycine max] |
| Swissprot | tr|Q680C0|GDL62_ARATH | 6.00E-44 | GDSL esterase/lipase At4g10955 |
| trEMBL | tr|I1KY04|I1KY04_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G42120.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00805 | 87949 | 90677 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.119 |
| SRR1783600 | control | 4.178 |
| SRR1783602 | moderate drought stress | 3.089 |
| SRR1811619 | moderate drought stress | 3.116 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.078 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.210 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.696 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.694 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.286 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.355 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 9.371 |
| SRR2868004 | Drought Stress (root) | 4.113 |
| SRR2967015 | Control (root) | 4.239 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.877 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.200 |
| SRR9715739 | Root | 3.905 |
| SRR9715742 | Root | 1.612 |
| SRR9715743 | Root | 2.078 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 4.784 |
| SRR8749028 | MeJA induced 9h | 4.364 |
| SRR8749029 | MeJA induced 9h | 2.112 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.153 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 7.027 |
| SRR8400027 | Control - Root | 7.731 |