Gene detail information of Glyur000805s00021376 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G07810.1 | 1.00E-44 | ER-type Ca2+-ATPase 1 |
| NR | XP_003625545.1 | 6.15E-55 | Calcium-transporting ATPase 1, endoplasmic reticulum-type [Medicago truncatula] |
| COG | YP_753323.1 | 2.00E-17 | cation transporting ATPase-like protein [Syntrophomonas wolfei subsp. wolfei str. Goettingen] |
| Swissprot | tr|P92939|ECA1_ARATH | 1.00E-50 | Calcium-transporting ATPase 1, endoplasmic reticulum-type |
| trEMBL | tr|A0A022PRF4|A0A022PRF4_ERYGU | 5.00E-54 | Uncharacterized protein {ECO:0000313|EMBL:EYU18907.1} (Fragment) |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00805 | 79897 | 80909 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000805s00021376.1 | PF00122.15 | E1-E2_ATPase | 55 | 119 | 1.10E-15 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 14.025 |
| SRR1783600 | control | 13.442 |
| SRR1783602 | moderate drought stress | 11.392 |
| SRR1811619 | moderate drought stress | 12.165 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.283 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 7.436 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.788 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.568 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.266 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.618 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.000 |
| SRR2868004 | Drought Stress (root) | 0.477 |
| SRR2967015 | Control (root) | 0.108 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.246 |
| SRR9715740 | Leaf | 0.070 |
| SRR9715741 | Leaf | 0.004 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.003 |
| SRR9715743 | Root | 0.393 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.413 |
| SRR8749028 | MeJA induced 9h | 0.013 |
| SRR8749029 | MeJA induced 9h | 0.027 |
| SRR8749030 | Uninduced | 0.799 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 1.155 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.000 |
| SRR8400027 | Control - Root | 0.004 |