Gene detail

Gene detail information of Glyur000805s00021367

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT3G59080.1	3.00E-155	Eukaryotic aspartyl protease family protein
NR	XP_003553140.1	0	PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 1-like [Glycine max]
Swissprot	tr\|Q766C2\|NEP2_NEPGR	5.00E-51	Aspartic proteinase nepenthesin-2 (Precursor)
trEMBL	tr\|I1N0Z7\|I1N0Z7_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA18G13290.1}

Sequence

Transcript Sequence

>Glyur000805s00021367.1
ATGGTTTTGAAGGTTTCTCTCATTCTGGTTCTCGTTGTGTTTCATTCCTGCACTGTGGAAGCCATTTCTGGGAATCACAATCACAATAGTGTCAATAAGAAAGGATATTCTCTTGCTGGAATCAAGTTACCAGATCATCCAAGCTTCAATGCTGTTTCTTCTTCAGTGGATACTGGGTGTAGCTTCTCAAATTCAGAGAAATTTGGCCATTCTAGAGTAACCATGAATGGTGATGGTGATGGTGATGGTGATGATGGTGAAGTGGAAGAAGCTTTACTAGCAGCAAAACAGCACAAGCAACCTGTGAAACTCCATTTGAAACACCAGCCAATAAACAAAGATGCTGATTTTGCAGTGAGAGACTTGACAAGAATTGAGACCCTTCATAGAAGGGTCAAAGAAAAGAAGAACCAAAACACCATTTCAAGGCTGCAGAAAAAAGCACAGGAGCAGCAATCAAAGAAGTCCTATAAGCCGGTGGTTGCTCCGGTCGCTCCTCCGCCTGAATACATCACCGGAAACTACTCCGATCAGCTTGTGGCAACCTTGAAGTCAGGGGTCAGTCTTGGCTCTGGTGAGTACTTCATGGATGTGTTTCAAAATGGACCATATTACGATCCTAGAGATTCTAGTTCTTTTAAGAATATAAGTTGTCATGATCAAAGGTGCCAATTGGTGTCATCCCCAGATCCTCCTCACCCTTGCAAAGCTGAGAATCAAAGCTGCCCCTATTTCTATTGGTATGGTGATAGTTCCAATACTACTGGGGATTTTGCACTTGAGTCTTTCACAGTTAACCTTACTACCACACCTAATGGGGGAACTGAGATCAAGCTTGTTGAGAATGTTATGTTTGGTTGTGGTCATTGGAATAGAGGCCTATTTCATGGTGCTGCTGGATTGTTGGGCTTGGGGAGAGGGCCATTGTCATTTGCTTCTCAGCTTCAATCACTCTATGGCCATTCCTTTTCCTATTGCCTTGTGGATAGGAATAGCAATTCAAATGTCAGCAGCAAGTTGATATTTGGTGAGGACAAGGAGCTTCTCAGCCACCCCAATTTGAATTTCACTTCCTTTGTTGGTGGGAAAGAAAATCCTGTTGACACATTTTACTATGTCCAGATCAAATCCATCATGGTTGGTGGTGAGGTGCTAGAGATACCAGAGGAGACTTGGCATTTGTCAGCAGCAAAAGAAGGTGGTGGTGGTGGTGGTACAATCATTGATTCTGGTACCACTCTAACTTACTTTGCTGAACCTGCTTATGAGATTATCAAGGAGGCATTCAGGAAGAAGATTAAGGGGTATCCACTTGTTGAAAGCTTCCCTCCTCTTAAGCCATGCTATAATGTGAGTGGGATTGAACAAATGGAGCTGCCTGAATTTGGGATCTTGTTTGCAGATGGAGCTGTGTGGGATTTCCCTGTGGAGAATTACTTTATCCAGATTGAACCAGATGATGTTGTTTGCTTGGCTATTTTGGGGACTCCTAGGTCTGCCCTTTCAATAATTGGGAACTATCAGCAGCAGAATTTTCACATCTTGTATGATATGAAGAAATCCAGACTTGGGTTTGCACCAATGAAGTGTGCTGATGTTTAA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00805	49628	51322	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006508 proteolysis

molecular_function
GO:0004190 aspartic-type endopeptidase activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000805s00021367.1	PF14543.1	TAXi_N	201	343	1.70E-31
Glyur000805s00021367.1	PF14541.1	TAXi_C	370	527	7.70E-38

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	2.035
SRR1783600	control	1.911
SRR1783602	moderate drought stress	2.236
SRR1811619	moderate drought stress	2.184

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	8.627
DRR006520	Root Summer glycyrrhizin high producing strain	8.223
DRR006521	Root Winter glycyrrhizin high producing strain	0.207
DRR006522	Root Winter glycyrrhizin high producing strain	0.197
DRR006523	Root Summer glycyrrhizin low producing strain	9.978
DRR006524	Root Summer glycyrrhizin low producing strain	10.106
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.302
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.347

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	11.112
SRR2868004	Drought Stress (root)	23.787
SRR2967015	Control (root)	22.102

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	6.654
SRR9715740	Leaf	3.047
SRR9715741	Leaf	6.298
SRR9715739	Root	7.604
SRR9715742	Root	10.164
SRR9715743	Root	10.274

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	19.209
SRR8749028	MeJA induced 9h	24.976
SRR8749029	MeJA induced 9h	17.069
SRR8749030	Uninduced	21.012
SRR8749031	Uninduced	23.335
SRR8749032	Uninduced	15.793

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	6.812
SRR8400027	Control - Root	9.570