Gene detail information of Glyur000804s00033422 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G60450.1 | 4.00E-17 | Phosphoglycerate mutase family protein |
| NR | AFK38103.1 | 2.80E-36 | unknown [Medicago truncatula] |
| trEMBL | tr|I3SCW1|I3SCW1_MEDTR | 1.00E-36 | Uncharacterized protein {ECO:0000313|EMBL:AFK38103.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00804 | 34377 | 35207 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.244 |
| SRR1783600 | control | 0.707 |
| SRR1783602 | moderate drought stress | 0.221 |
| SRR1811619 | moderate drought stress | 0.216 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.430 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.420 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.655 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.009 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.857 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.277 |
| SRR2868004 | Drought Stress (root) | 0.581 |
| SRR2967015 | Control (root) | 0.201 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.402 |
| SRR9715740 | Leaf | 0.320 |
| SRR9715741 | Leaf | 1.405 |
| SRR9715739 | Root | 1.275 |
| SRR9715742 | Root | 0.531 |
| SRR9715743 | Root | 0.521 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.968 |
| SRR8749028 | MeJA induced 9h | 3.007 |
| SRR8749029 | MeJA induced 9h | 5.426 |
| SRR8749030 | Uninduced | 3.305 |
| SRR8749031 | Uninduced | 4.276 |
| SRR8749032 | Uninduced | 1.900 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.272 |
| SRR8400027 | Control - Root | 0.438 |