Gene detail information of Glyur000804s00033421 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G60450.1 | 1.00E-37 | Phosphoglycerate mutase family protein |
| NR | AFK38103.1 | 6.40E-75 | unknown [Medicago truncatula] |
| trEMBL | tr|I3SCW1|I3SCW1_MEDTR | 2.00E-75 | Uncharacterized protein {ECO:0000313|EMBL:AFK38103.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00804 | 26033 | 27138 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.272 |
| SRR1783600 | control | 3.565 |
| SRR1783602 | moderate drought stress | 0.982 |
| SRR1811619 | moderate drought stress | 0.664 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.660 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.578 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.303 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.190 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 8.699 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 10.561 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.186 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.590 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 16.663 |
| SRR2868004 | Drought Stress (root) | 33.433 |
| SRR2967015 | Control (root) | 21.462 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 22.557 |
| SRR9715740 | Leaf | 22.398 |
| SRR9715741 | Leaf | 33.835 |
| SRR9715739 | Root | 5.351 |
| SRR9715742 | Root | 7.597 |
| SRR9715743 | Root | 6.769 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 57.019 |
| SRR8749028 | MeJA induced 9h | 49.858 |
| SRR8749029 | MeJA induced 9h | 91.606 |
| SRR8749030 | Uninduced | 74.661 |
| SRR8749031 | Uninduced | 48.255 |
| SRR8749032 | Uninduced | 58.615 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 8.895 |
| SRR8400027 | Control - Root | 10.320 |