Gene detail information of Glyur000804s00033420 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_004516280.1 | 5.48E-11 | PREDICTED: uncharacterized protein LOC101497729 [Cicer arietinum] |
| trEMBL | tr|I1JMU2|I1JMU2_SOYBN | 2.00E-08 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA03G26840.1} (Fragment) |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00804 | 19321 | 23816 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.027 |
| SRR1783600 | control | 2.267 |
| SRR1783602 | moderate drought stress | 0.883 |
| SRR1811619 | moderate drought stress | 0.857 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.221 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.523 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.726 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.643 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 6.758 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 7.130 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.586 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.097 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 4.106 |
| SRR2868004 | Drought Stress (root) | 6.365 |
| SRR2967015 | Control (root) | 4.388 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.978 |
| SRR9715740 | Leaf | 2.596 |
| SRR9715741 | Leaf | 3.991 |
| SRR9715739 | Root | 1.103 |
| SRR9715742 | Root | 0.792 |
| SRR9715743 | Root | 1.319 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.486 |
| SRR8749028 | MeJA induced 9h | 6.833 |
| SRR8749029 | MeJA induced 9h | 8.664 |
| SRR8749030 | Uninduced | 5.586 |
| SRR8749031 | Uninduced | 5.556 |
| SRR8749032 | Uninduced | 5.962 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.963 |
| SRR8400027 | Control - Root | 2.232 |