Gene detail information of Glyur000802s00023730 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G42760.1 | 1.00E-25 | |
| NR | XP_007149725.1 | 4.27E-97 | hypothetical protein PHAVU_005G093900g [Phaseolus vulgaris] |
| trEMBL | tr|V7BUU9|V7BUU9_PHAVU | 2.00E-97 | Uncharacterized protein {ECO:0000313|EMBL:ESW21719.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00802 | 74539 | 75291 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000802s00023730.1 | PF07939.6 | DUF1685 | 142 | 173 | 5.30E-06 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.816 |
| SRR1783600 | control | 2.181 |
| SRR1783602 | moderate drought stress | 8.072 |
| SRR1811619 | moderate drought stress | 8.544 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.942 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.609 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.147 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.211 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.137 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.759 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 8.341 |
| SRR2868004 | Drought Stress (root) | 12.118 |
| SRR2967015 | Control (root) | 11.465 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.957 |
| SRR9715740 | Leaf | 2.693 |
| SRR9715741 | Leaf | 1.541 |
| SRR9715739 | Root | 0.871 |
| SRR9715742 | Root | 0.295 |
| SRR9715743 | Root | 0.520 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.217 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.090 |
| SRR8749031 | Uninduced | 0.053 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.964 |
| SRR8400027 | Control - Root | 3.132 |