Gene detail

Gene detail information of Glyur000802s00023722

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G05340.1	1.00E-108	Peroxidase superfamily protein
NR	XP_003527340.1	0	PREDICTED: peroxidase 52-like [Glycine max]
Swissprot	tr\|A7NY33\|PER4_VITVI	4.00E-135	Peroxidase 4 {ECO:0000250\|UniProtKB:Q42578} (Precursor)
trEMBL	tr\|I1KEL7\|I1KEL7_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA06G42850.1}

Sequence

Transcript Sequence

>Glyur000802s00023722.1
TACAATTCCTCTATATATTGCACACCTCTCCCACAGGCTTCTTCACAATAGCCACACACAACACAATCCTTTCACCACACAAAGTGCTGAAAGCTGCTATAGCTAGATATAGAGATGGCCCCTCTTACCAAAAACTTGTTTGTTACACTCTCNATTCTAATTTTTACTCTCTTGGCAAGTTCTAGTACCAATGCACAACTTTCTCCCAACTTCTATGCTAAAACTTGTCCTAGACTTCAACCCATTGTGCGCAATGCAATGAGCCAAGCTATCAATAGAGAAGCCCGTCTTGGTGCCTCTATACTTCGCTTGTTCTTCCATGACTGCTTCGTAAATGGCTGCGATGCATCAATCTTATTGGATGACACAGCCACATTTGTCGGTGAGAANAATGCAGCACCTAACCAAAATACAGCCAGGGGTTTCGAAGTGATTGATACCATTAAAACCAACGTTGAAGCTGCTTGCGCTGGCACGGTCTCTTGTGCAGATATTCTAGCACTTGCAACAAGAGATGGAATAGCTTTGCTTGGAGGGCCCTCATGGACAGTACCACTTGGGAGAAGAGATGCAAGAACAGCAAGCCAGAGTGCAGCCAACAACCAAATCCCTTCACCATTCTCTGACCTCTCCACCCTCACTTCCATGTTTGCAGCCAAAGGACTAAATGCACGTGACCTCACGGTTCTCTCTGGTGCACACACCATAGGCCAAGGACAGTGCCAGTTTTTCAGGAACCGAATNTACAATGAGACCAACATTGACACCAACTTCGCCACCACTAGAAAAGCCAATTGCCCTGCCTCTGGTGGTGACACCAATTTGGCCCCTCTTGAGAATCTCACTCCCAATCGTTTTGACAACAACTACTACAGAGACCTTGTTGCTCGCCGTGGCTTATTCCATTCAGATCAAGTGCTTTTCAATAATGGGTCTCAAGATGCTTTGGTTAGGACTTATAGTACCAATAGTGTTGCCTTCTTCAGAGACTTTGCTGCTGCTATGGTGAAGATGAGTAATATTAGTCCTCTCACTNGGACTAATGGGGAAATCAGAAAGAATTGCAGGGTTGTGAACTAATATATCATTTTGATGTGTTTTTTGTGGGTGGGGGGGTAATAAATAATAATTAACATGAGGGCACATCAGCAATTGAATAAATATTAAATGCTGTGAGAGAGATTTTTGAGTGTTTGGTTAATTGCAGGGTCTAAAGTCATAAAGCTTGACTAGATCTTGGACACATTATTGGCAACTGTGCAGTGTATTGATGGTGCTTCTTTTCCTTCTCTGGTAGTTTGAATGTTTCTGGTTCATCAAATCAAATACATGATGAGCTGTTATGTATGTTGCCCATCTTACTTT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00802	36412	39812	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K00430	E1.11.1.7	EC:1.11.1.7	Phenylpropanoid biosynthesis	map00940

Gene Ontology

biological_process

GO:0006979 response to oxidative stress

GO:0055114 oxidation-reduction process

molecular_function

GO:0004601 peroxidase activity

GO:0020037 heme binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000802s00023722.1	PF00141.18	peroxidase	45	284	2.40E-76

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	81.530
SRR1783600	control	81.418
SRR1783602	moderate drought stress	11.308
SRR1811619	moderate drought stress	11.433

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	11.865
DRR006520	Root Summer glycyrrhizin high producing strain	11.507
DRR006521	Root Winter glycyrrhizin high producing strain	31.095
DRR006522	Root Winter glycyrrhizin high producing strain	30.349
DRR006523	Root Summer glycyrrhizin low producing strain	4.988
DRR006524	Root Summer glycyrrhizin low producing strain	5.007
DRR006525	Leaf Summer glycyrrhizin high producing strain	3.101
DRR006526	Leaf Summer glycyrrhizin high producing strain	3.087

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	78.115
SRR2868004	Drought Stress (root)	42.426
SRR2967015	Control (root)	47.289

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	90.910
SRR9715740	Leaf	6.783
SRR9715741	Leaf	36.019
SRR9715739	Root	12.337
SRR9715742	Root	14.456
SRR9715743	Root	14.603

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	102.663
SRR8749028	MeJA induced 9h	346.047
SRR8749029	MeJA induced 9h	274.906
SRR8749030	Uninduced	501.595
SRR8749031	Uninduced	499.464
SRR8749032	Uninduced	144.248

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	86.365
SRR8400027	Control - Root	61.312