Gene detail information of Glyur000801s00027051 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G39890.2 | 0 | proline transporter 1 |
| NR | XP_003616546.1 | 0 | Proline transporter [Medicago truncatula] |
| Swissprot | tr|P92961|PROT1_ARATH | 0 | Proline transporter 1 |
| trEMBL | tr|I1M7Z8|I1M7Z8_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA14G06850.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00801 | 102480 | 107209 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000801s00027051.1 | PF01490.13 | Aa_trans | 64 | 153 | 8.60E-14 |
| Glyur000801s00027051.1 | PF01490.13 | Aa_trans | 154 | 436 | 1.50E-50 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 51.095 |
| SRR1783600 | control | 50.658 |
| SRR1783602 | moderate drought stress | 33.592 |
| SRR1811619 | moderate drought stress | 33.670 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 79.865 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 80.162 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 25.902 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 25.482 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 99.888 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 100.825 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 28.547 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 28.459 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 107.548 |
| SRR2868004 | Drought Stress (root) | 63.766 |
| SRR2967015 | Control (root) | 83.957 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 22.162 |
| SRR9715740 | Leaf | 37.550 |
| SRR9715741 | Leaf | 35.966 |
| SRR9715739 | Root | 27.792 |
| SRR9715742 | Root | 41.392 |
| SRR9715743 | Root | 35.863 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 14.333 |
| SRR8749028 | MeJA induced 9h | 14.644 |
| SRR8749029 | MeJA induced 9h | 14.855 |
| SRR8749030 | Uninduced | 27.676 |
| SRR8749031 | Uninduced | 11.095 |
| SRR8749032 | Uninduced | 10.982 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 76.899 |
| SRR8400027 | Control - Root | 79.418 |