Gene detail information of Glyur000801s00027047


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G74270.16.00E-56Ribosomal protein L35Ae family protein
NRXP_011036020.16.98E-72PREDICTED: 60S ribosomal protein L35a-1 [Populus euphratica]
COGNP_126076.13.00E-1050S ribosomal protein L35Ae [Pyrococcus abyssi GE5]
Swissprottr|Q9C912|R35A3_ARATH3.00E-7160S ribosomal protein L35a-3
trEMBLtr|V7CL73|V7CL73_PHAVU3.00E-72Uncharacterized protein {ECO:0000313|EMBL:ESW30884.1}

Sequence

Transcript Sequence
Protein Sequence


Location information (JBrowse)

ScaffoldStartEndStrand
Scaffold008018940992455-


Gene family

Gene familysubfamily
----


KEGG pathway

KOEnzymeEnzyme IDpathwaymapID
----------


Gene Ontology

biological_process

GO:0006412  translation


cellular_component

GO:0005622  intracellular

GO:0005840  ribosome


molecular_function

GO:0003735  structural constituent of ribosome

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000801s00027047.1PF01247.13Ribosomal_L35Ae121064.10E-43


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control133.115
SRR1783600control134.729
SRR1783602moderate drought stress100.921
SRR1811619moderate drought stress98.828

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain208.266
DRR006520Root Summer glycyrrhizin high producing strain205.371
DRR006521Root Winter glycyrrhizin high producing strain124.938
DRR006522Root Winter glycyrrhizin high producing strain122.151
DRR006523Root Summer glycyrrhizin low producing strain140.424
DRR006524Root Summer glycyrrhizin low producing strain140.997
DRR006525Leaf Summer glycyrrhizin high producing strain84.304
DRR006526Leaf Summer glycyrrhizin high producing strain83.805

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress (root)362.796
SRR2868004Drought Stress (root)201.842
SRR2967015Control (root)195.791

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leaf66.114
SRR9715740Leaf49.774
SRR9715741Leaf40.020
SRR9715739Root68.908
SRR9715742Root67.881
SRR9715743Root73.578

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h341.248
SRR8749028MeJA induced 9h96.775
SRR8749029MeJA induced 9h313.522
SRR8749030Uninduced37.791
SRR8749031Uninduced36.902
SRR8749032Uninduced46.059

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment - Root239.620
SRR8400027Control - Root220.257

© 2021 Resource Institute for Chinese & Ethnic Materia Medica, Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved