Gene detail

Gene detail information of Glyur000801s00027045

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G05820.1	4.00E-81	Nucleotide-sugar transporter family protein
NR	XP_003544134.1	4.35E-121	PREDICTED: probable sugar phosphate/phosphate translocator At3g11320-like [Glycine max]
Swissprot	tr\|Q5XF09\|PT311_ARATH	2.00E-115	Probable sugar phosphate/phosphate translocator At3g11320
trEMBL	tr\|I1M7Z0\|I1M7Z0_SOYBN	2.00E-121	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA14G06810.1}

Sequence

Transcript Sequence

>Glyur000801s00027045.1
TATTTAGAAGGGATGATGAAGGGTTCGAGTCGAATGTTCACGATCGGGTTAGTGTCGGCGTGGTACTCGTCGAACATTGGGGTGTTGTTACTGAACAAGTACCTATTGAGCAACTACGGGTTCAAGTACCCGATATTTCTAACCATGTGTCACATGACGGCGTGTTCGTTGTTCAGCTACGTTGCGATAGCGTGGTTGAAGGTGGTACCCATGCAGACCATACGGTCGAGGGTTCAGTTCCTGAAGATCGCAGCGCTCAGCTTAGTTTTCTGCGTCTCTGTCGTGTTTGGTAACATCTCGCTCCGTTACTTACCCGTGAGTTTCAACCAGGCCGTTGGAGCCACAACGCCGTTCTTCACCGCCGTTTTCGCTTACGTCATNACGTTCAAGAGGGAGGCTTGGGTCACCTACCTAGCTCTCGTTCCCGTTGTCACTGGGGTCATCATTGCCAGCGGGGGTGAACCAAGCTTCCATTTGTTTGGGTTCATAATATGTGTTGCAGCTACTGCTGCACGAGCCCTTAAATCAGTGTTACAAGGAATTTTACTTTCATCTGAAGGTCATTTGTCTGTGGTGGTGGTACTTGGGAATGCTAAAGGTGCAGTAGCAGTAGTAGTTTCAATCCTGATATTTAGAAACCCAGTTTCAGTCACTGGAATGATGGGTTATTCACTCACCGTCCTTGGAGTTGTACTTTATAGTGAAGCCAAAAAGCGAAGCAAGTGATAATGATAATGTGACAATNTCATTATTGGGAAGTCAGCAGTGAATTCTATATATTTTGTTTTCATCACTGCGAGGTCAACCTCAAGATTCCATGAGACAAATTTGTTAGCATGACTCTGATCAGAATCTGGATGTTTCAGACTCTTATATACAATTCTTTTCGGCCCCACATGGAAAGCCTCATTGAACGGATTCCCCATTGTATTAGAAACTGTCACAAATATAGCCCACGGTACAGAGTTCCAATAAGTGGATCGATCTCTCTACTATACCCATGTTGGCATATCAAGGAATGTCCTTTTGTCATTTATTCTTTGAAGAAAGAGTTGTAGAATTGTTTTAGCAAAAAAAAAAAGAGTTGTA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00801	79710	83054	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

cellular_component

GO:0016020 membrane

GO:0016021 integral component of membrane

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000801s00027045.1	PF00892.15	EamA	32	150	1.20E-05
Glyur000801s00027045.1	PF03151.11	TPT	193	234	3.80E-07

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	30.518
SRR1783600	control	31.488
SRR1783602	moderate drought stress	15.934
SRR1811619	moderate drought stress	15.941

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	101.314
DRR006520	Root Summer glycyrrhizin high producing strain	100.022
DRR006521	Root Winter glycyrrhizin high producing strain	16.652
DRR006522	Root Winter glycyrrhizin high producing strain	17.312
DRR006523	Root Summer glycyrrhizin low producing strain	100.726
DRR006524	Root Summer glycyrrhizin low producing strain	100.371
DRR006525	Leaf Summer glycyrrhizin high producing strain	37.317
DRR006526	Leaf Summer glycyrrhizin high producing strain	37.683

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	29.392
SRR2868004	Drought Stress (root)	36.467
SRR2967015	Control (root)	37.468

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	83.413
SRR9715740	Leaf	29.702
SRR9715741	Leaf	86.396
SRR9715739	Root	46.916
SRR9715742	Root	208.755
SRR9715743	Root	170.171

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	309.806
SRR8749028	MeJA induced 9h	148.173
SRR8749029	MeJA induced 9h	247.849
SRR8749030	Uninduced	422.661
SRR8749031	Uninduced	237.331
SRR8749032	Uninduced	189.408

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	29.045
SRR8400027	Control - Root	49.950