Gene detail information of Glyur000801s00027042 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G39920.3 | 2.00E-32 | HAD superfamily, subfamily IIIB acid phosphatase |
| NR | XP_003616557.1 | 5.81E-163 | hypothetical protein MTR_5g081740 [Medicago truncatula] |
| Swissprot | tr|O04195|Y2992_ARATH | 5.00E-61 | Uncharacterized protein At2g39920 |
| trEMBL | tr|G7KBV9|G7KBV9_MEDTR | 2.00E-163 | Acid phosphatase-like protein {ECO:0000313|EMBL:AES99515.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00801 | 67995 | 71974 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000801s00027042.1 | PF03767.9 | Acid_phosphat_B | 184 | 281 | 4.80E-08 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.794 |
| SRR1783600 | control | 4.819 |
| SRR1783602 | moderate drought stress | 3.818 |
| SRR1811619 | moderate drought stress | 3.813 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 24.664 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 24.027 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 23.734 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 23.209 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 22.676 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 22.595 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.150 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.330 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 8.544 |
| SRR2868004 | Drought Stress (root) | 7.090 |
| SRR2967015 | Control (root) | 8.637 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.330 |
| SRR9715740 | Leaf | 4.702 |
| SRR9715741 | Leaf | 3.719 |
| SRR9715739 | Root | 5.001 |
| SRR9715742 | Root | 5.299 |
| SRR9715743 | Root | 6.235 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.235 |
| SRR8749028 | MeJA induced 9h | 4.557 |
| SRR8749029 | MeJA induced 9h | 3.144 |
| SRR8749030 | Uninduced | 2.162 |
| SRR8749031 | Uninduced | 1.674 |
| SRR8749032 | Uninduced | 1.277 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 12.419 |
| SRR8400027 | Control - Root | 15.604 |