Gene detail information of Glyur000801s00027037.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G38090.1 | 2.00E-72 | Duplicated homeodomain-like superfamily protein |
| NR | NP_001235748.1 | 1.28E-176 | MYB transcription factor MYB75 [Glycine max] |
| Swissprot | tr|Q8S9H7|DIV_ANTMA | 1.00E-82 | Transcription factor DIVARICATA |
| trEMBL | tr|Q0PJK8|Q0PJK8_SOYBN | 5.00E-177 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA14G06750.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00801 | 42367 | 45370 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | MYB-related |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000801s00027037.1 | PF00249.26 | Myb_DNA-binding | 128 | 172 | 3.20E-10 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 45.753 |
| SRR1783600 | control | 46.062 |
| SRR1783602 | moderate drought stress | 57.144 |
| SRR1811619 | moderate drought stress | 57.229 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 60.334 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 59.519 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 24.198 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 23.837 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 72.875 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 73.046 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 15.430 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 15.360 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 71.703 |
| SRR2868004 | Drought Stress (root) | 128.746 |
| SRR2967015 | Control (root) | 168.621 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 17.390 |
| SRR9715740 | Leaf | 26.929 |
| SRR9715741 | Leaf | 24.623 |
| SRR9715739 | Root | 19.600 |
| SRR9715742 | Root | 69.762 |
| SRR9715743 | Root | 59.964 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 4.269 |
| SRR8749028 | MeJA induced 9h | 12.124 |
| SRR8749029 | MeJA induced 9h | 4.779 |
| SRR8749030 | Uninduced | 3.776 |
| SRR8749031 | Uninduced | 1.455 |
| SRR8749032 | Uninduced | 3.330 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 72.760 |
| SRR8400027 | Control - Root | 82.557 |