Gene detail information of Glyur000799s00036484 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G02120.1 | 5.00E-27 | one helix protein |
| NR | KEH22958.1 | 3.00E-60 | one helix protein OHP [Medicago truncatula] |
| Swissprot | tr|O81208|HLIP_ARATH | 1.00E-33 | High-light-induced protein, chloroplastic (Precursor) |
| trEMBL | tr|A0A072U1E0|A0A072U1E0_MEDTR | 1.00E-60 | One helix protein OHP {ECO:0000313|EMBL:KEH22958.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00799 | 2558 | 4193 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.229 |
| SRR1783600 | control | 1.160 |
| SRR1783602 | moderate drought stress | 2.691 |
| SRR1811619 | moderate drought stress | 2.994 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.143 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.449 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.439 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.074 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 170.314 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 168.164 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 4.817 |
| SRR2868004 | Drought Stress (root) | 9.617 |
| SRR2967015 | Control (root) | 4.512 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 77.033 |
| SRR9715740 | Leaf | 1.286 |
| SRR9715741 | Leaf | 86.439 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.917 |
| SRR9715743 | Root | 0.285 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 5.881 |
| SRR8749028 | MeJA induced 9h | 3.248 |
| SRR8749029 | MeJA induced 9h | 4.865 |
| SRR8749030 | Uninduced | 2.786 |
| SRR8749031 | Uninduced | 3.944 |
| SRR8749032 | Uninduced | 2.412 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 6.276 |
| SRR8400027 | Control - Root | 4.490 |