Gene detail information of Glyur000799s00036483 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G60280.1 | 1.00E-07 | Concanavalin A-like lectin protein kinase family protein |
| NR | KEH22938.1 | 2.28E-15 | L-type lectin-domain receptor kinase IV.2-like protein [Medicago truncatula] |
| Swissprot | tr|Q9LSR9|LRK18_ARATH | 4.00E-09 | L-type lectin-domain containing receptor kinase I.8 (Precursor) |
| trEMBL | tr|A0A072U1C6|A0A072U1C6_MEDTR | 9.00E-16 | L-type lectin-domain receptor kinase IV.2-like protein {ECO:0000313|EMBL:KEH22938.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00799 | 2 | 163 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000799s00036483.1 | PF00139.14 | Lectin_legB | 21 | 54 | 1.20E-05 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.745 |
| SRR1783600 | control | 4.756 |
| SRR1783602 | moderate drought stress | 4.364 |
| SRR1811619 | moderate drought stress | 4.297 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.574 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.882 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.361 |
| SRR2868004 | Drought Stress (root) | 1.309 |
| SRR2967015 | Control (root) | 0.266 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 6.814 |
| SRR9715740 | Leaf | 3.065 |
| SRR9715741 | Leaf | 9.251 |
| SRR9715739 | Root | 1.645 |
| SRR9715742 | Root | 1.451 |
| SRR9715743 | Root | 2.497 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.207 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.796 |
| SRR8400027 | Control - Root | 2.081 |