Gene detail information of Glyur000798s00031096 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G44735.2 | 6.00E-06 | PHYTOSULFOKINE 3 PRECURSOR |
| NR | KEH42096.1 | 7.01E-31 | phytosulfokine precursor protein [Medicago truncatula] |
| Swissprot | tr|Q8LA14|PSK6_ARATH | 3.00E-11 | Phytosulfokine-beta (Precursor) |
| trEMBL | tr|A0A072VKD5|A0A072VKD5_MEDTR | 3.00E-31 | Phytosulfokine protein {ECO:0000313|EMBL:KEH42096.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00798 | 57287 | 58669 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000798s00031096.1 | PF06404.7 | PSK | 11 | 94 | 1.40E-17 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 39.613 |
| SRR1783600 | control | 39.108 |
| SRR1783602 | moderate drought stress | 20.218 |
| SRR1811619 | moderate drought stress | 19.819 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 11.431 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 11.434 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.125 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.122 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 21.096 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 20.652 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 12.479 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 11.601 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 7.286 |
| SRR2868004 | Drought Stress (root) | 7.145 |
| SRR2967015 | Control (root) | 7.830 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 7.826 |
| SRR9715740 | Leaf | 3.506 |
| SRR9715741 | Leaf | 3.517 |
| SRR9715739 | Root | 2.533 |
| SRR9715742 | Root | 5.254 |
| SRR9715743 | Root | 4.401 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.040 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.087 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 13.169 |
| SRR8400027 | Control - Root | 15.020 |